UFO07292.5prime Sequence
1180 bp (1071 high quality bases) assembled on 2011-06-24
> UFO07292.5prime
CAGTCGACATGTCCACGCCCACTTCCCCGAAGACGCCCACACCGCCCACT
TTGCCACCGGGCGTGACCAAAACATGTCACATTGTGAAAAGGCCCGATTT
CGATGGCTATGGTTTCAATTTGCATTCGGAGAAGGTGAAACCAGGACAGT
TTATTGGCAAAGTAGATGCGGATTCTCCGGCAGAGGCAGCCGGCCTGAAG
GAGGGCGATCGCATCCTGGAGGTCAACGGGGTGTCCATTGGCAGCGAGAC
CCACAAGCAGGTGGTTGCCAGGATCAAGGCCATTGCGAATGAAGTCCGCT
TGCTGCTCATCGATGTGGATGGCAAGGCCTTGGAGGTGAAACCGGCATCT
CCGCCAGCCGCTGCGTGCAATGGAAACGGTAGTGCCAGTCAGAATGGATA
CGAGGGCACCAAACAGGAGATGCCCGGAGCAAGTGCCAATATCAGTAGCA
TCAGTATGGTGAGCACCAAGCGATCCTCAAATGCCAGCAGCATTCAGAGC
GGCAGTACCATGAATGCCTCCGATTTGGATGTGGTCGATAGGGGAATACC
GGCAGTCGCTGCTCCGGTGGCTATCACCCCGCCTCCCGTTCAAAATGGAA
GTAAACCCTCATCGCCGATTAATAATAACACTTTGATGAGCACACCGCCA
CCGCCGTCCGCTACTAAGGCTGGCATCAACAACAATGGCAGTGTTTATAA
CACCAATGGAAATGGTACAAATGGCATGACCACACCCACTACACCACCCC
CACCGACCAGTGGCTATAAGGCGGGCACCTTGCATTTACCAATGACGGCC
GCCGAAATGCGCGCCAAATTGGCATCCAAGAAGAAGTACGATCCCAAGAA
CGAGAGTGTGACCTCAAGAAGAAGTTCGACATCATTCAGAAGCTCGCAAG
CTTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAAT
CATAATCATAATCATATCATATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCATAAAAACGCCCGGCGGGCCACGAGCGT
TCTTGAACAATCCAGATGGAGTCTGGAGGGTCATTACTGGATCTATCACA
GGATCAAGCCGAGCTCGGATATCCAATATACGTACCCCGCCTGCCACTCA
CTCGCGAATCCGTTGTAATTCATAGGCACT
UFO07292.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:48:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sip1-RA | 1717 | CG10939-RA | 436..1330 | 2..895 | 4420 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:48:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17403890..17404784 | 2..895 | 4395 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:48:02 has no hits.
UFO07292.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:24 Download gff for
UFO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sip1-RA | 432..1327 | 1..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:54 Download gff for
UFO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sip1-RA | 435..1330 | 1..895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:58 Download gff for
UFO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sip1-RA | 435..1330 | 1..895 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:58 Download gff for
UFO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17403889..17404784 | 1..895 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:54 Download gff for
UFO07292.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13291394..13292289 | 1..895 | 99 | == | Plus |
