UFO07294.5prime Sequence
1163 bp (1034 high quality bases) assembled on 2011-06-24
> UFO07294.5prime
CAGTCGACATGTGGAGGAAAGCGAGCAGGTTGGTCAGGGAAACCACCTCG
TGGAAAACGCGTCGTCAGGGACAAGCGGAAGCCCCATCAGCAGCAGTAGC
AACAATAAAACCATCGACAAGGACGAGCACGCCGATTGCCCACGGATTAC
CCATCATCATCACATGGTCGCAGCTCGCTATTGTTGCTGCTGTTGCAGTG
CTCCTGCAATGCCACGTCTGTCAAGCAGCCGGACGAGCTCCACCGGAACC
CTACTACGGTCGCTATATTGGAGATTTTACCAACTTTGCCCATGGCATTA
AGGGTCAAATCTACGCGGTGGACGAGTCGACGCTGTTCGTCAAATCCTTT
GCCTACGACGGCACCGGACCGGACGCCTTCTTCTGGGTGGGCAAGACGCC
AAGGCCCAGTCCCGATGGCTACATCATTCCCTATCCGGAGGAGTACACGG
GCATGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGA
AGAAGTTGTCCATATTGGCCACGTTTAAATCAAACTGGTGAAACTCACCC
AGGGATTGGCTGAGACGAAAAACATATTCTCAATAACCCTTTAGGAAATA
GGCCAGGTTTTCACCGTACACGCCACATCTTGCGATATATGTGTAGAACT
GCCGAAATCGTCTGTATTCACTCAGAGCGATGAAACGTTCAGTTTGCCTC
ATGGAAACGGTGTTACAGTGAACCTATTCCAAATCACCAGCCTCCACGTC
TTTCATGCATTCGAGTCGATGACTCTCAGCGCAGATGAATAGCGAATAAA
CTGGTGCCTTATT
UFO07294.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:47:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34355-RF | 6414 | CG34355-RF | 1118..1565 | 9..456 | 2240 | 100 | Plus |
| CG34355-RB | 6235 | CG34355-RB | 939..1386 | 9..456 | 2240 | 100 | Plus |
| CG34355-RE | 6256 | CG34355-RE | 939..1386 | 9..456 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:47:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23821530..23821746 | 9..225 | 1085 | 100 | Plus |
| 3R | 32079331 | 3R | 23830176..23830330 | 301..455 | 775 | 100 | Plus |
| 3R | 32079331 | 3R | 23829955..23830034 | 224..303 | 400 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:47:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2496..2530 | 85..119 | 112 | 80 | Plus |
UFO07294.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:43:19 Download gff for
UFO07294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34355-RB | 908..1364 | 1..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:02:36 Download gff for
UFO07294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34355-RE | 930..1386 | 1..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:51:43 Download gff for
UFO07294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34355-RE | 930..1386 | 1..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:43 Download gff for
UFO07294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23821521..23821746 | 1..225 | 98 | -> | Plus |
| 3R | 23829957..23830033 | 226..302 | 100 | -> | Plus |
| 3R | 23830178..23830330 | 303..455 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:02:36 Download gff for
UFO07294.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19647243..19647468 | 1..225 | 98 | -> | Plus |
| arm_3R | 19655679..19655755 | 226..302 | 100 | -> | Plus |
| arm_3R | 19655900..19656052 | 303..455 | 100 | == | Plus |
