UFO07302.5prime Sequence
1126 bp (968 high quality bases) assembled on 2011-06-23
> UFO07302.5prime
CAGTCGACATGTTGCCGAAATTAAAAACCGGTGGAGGGTTCTTCTCCTAT
TTTAAGACTGAAAAGGGCCGAAAACTCGTATTCTACGCGGCGGGAGCCAC
CACAGTGGGCCTCTTTCTTGGAAACTTCCTGCCGCACACATTCGGCCTGA
AATATTACCGCGATTTCGTGCAATGCTACCAACACGGCGTGGGGCGTCCA
GTGCCGGAGGCAGTGCAGCAGCGCCTGGAAAAGGCATTGGATCAGCTGGG
CGTGACGCCCTTTGAGCGAAAGTTTGTGAAGCCCTTCACCGTCTTTGGAT
TCGATGTTTTCCAGGCGGGCACCACTAAGTTTCGATTTGGAGGCGCTTTG
GGCATACCGGTGAACTATGGATACGACAGTCTGGAGGAGATTAAGCGGGC
AGACATTCGGTTTAGAGACAAACAGATCAACTGGAGTTCTCCCAGCGGAA
AACTGCTAGAGGAAGCCATCGTTTTGAATGAGGATGAACAGATTTTCGGT
CTTAGCAAGGCTGTTCTGCAGATGCAAACCCATCGGGTACTGCTCAACTC
CATCTTTCCCAGCGTCAGCTTTCTTATGGTTTACACCATGGGTCACTACC
TCAACCTGCGGCTAGATCTCTTCGCCCGCCATGGAAGCGTGCGGTTTGTG
CTCTACAGCATTCTGGGTCTGTTTGGCTTAGGGCTCTGGTCCTTCATGAA
AGACTACAATCAGGTCTCTACGGACGCAGAGATTGACCAGCGACTGGCCA
CGATGGGTCCCCAACTTGTGGCAGCTGGAGCTAGCTTTTCGACAAACATC
TAAAGAAGAACATCGCGCTGAGGGAGCTGATTGGAAATGACGTTTACACT
GCACTGGGCAACGAAAACTATATGATCGGCAAAGTCATGCCGCTACAGCA
CGAAATCTTTTTCTGAGAGTGAGACTCAAAGCCACAGCTGACAGCACTCA
ACATCGTGCGCGGCAGATGTTATCTACATACTATTATCACAGCAGATCGT
AGATGTGATCCAAAAGCGGGACAGTCAAACAGTTAGTCGTAAGCAACTAA
TCCCGCTCATGATATCAGCAGACACGCTCGATCGAGATGTAGCTGATCAG
TCCTAGATCATCAGACTACGAGTTCA
UFO07302.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33506-RA | 1073 | CG33506-RA | 45..952 | 9..910 | 4390 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:11:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14857905..14858364 | 641..182 | 2300 | 100 | Minus |
| 2R | 25286936 | 2R | 14857607..14857845 | 876..639 | 1145 | 99.6 | Minus |
| 2R | 25286936 | 2R | 14858424..14858596 | 181..9 | 865 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:12:01 has no hits.
UFO07302.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:53 Download gff for
UFO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33506-RA | 28..955 | 1..919 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:13 Download gff for
UFO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33506-RA | 35..962 | 1..919 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:44 Download gff for
UFO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33506-RA | 35..962 | 1..919 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:44 Download gff for
UFO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14857558..14857845 | 639..919 | 96 | <- | Minus |
| 2R | 14857908..14858364 | 182..638 | 100 | <- | Minus |
| 2R | 14858424..14858601 | 1..181 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:13 Download gff for
UFO07302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10745063..10745350 | 639..919 | 96 | <- | Minus |
| arm_2R | 10745413..10745869 | 182..638 | 100 | <- | Minus |
| arm_2R | 10745929..10746106 | 1..181 | 97 | | Minus |
