UFO07306.5prime Sequence
1108 bp (830 high quality bases) assembled on 2011-06-23
> UFO07306.5prime
CAGTCGACATGGAGCCCACATGCAGCAGCAGTGTGGCGGAATTGGCCAAA
TACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTGGTGGAGCATCA
GGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCGTAAGCGGAAAC
GATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGAGTACGGGCGCC
ATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTACATGCACTTAAG
ACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAAGGATCGGGGGC
AAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCGCTGCGGGAGTG
GCTGACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGAC
ATGGAAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCGCCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAAGTTGTCCATATTGGGCCACGTTTTAAATCAAAAAGTGGTGAAAC
TCACCCAGGGATTGTGCTGAGACGATAAACATTATTCCTCAATCAACCCT
TTAGGGAAATAGGCCAGGTTTTCACCGTACCACGGCCACATTCTTGCGAA
TATATGTGTAGAAACCTGCCGGAAATCGGTCGTGGTATTCACTTCCAAAG
CGATGAAAAAGTTTTCAATTTTGCTTCATGGAAAACGGTGGTAACCAGGG
TGTGAACACCCAACCCAATGTCCAGCCTCACCGTAGACCCTTTGCCCAAA
CAAAAATCTGGATGGGCCATTCCACAAGGCGGGGGAAAAATGTGTGGAAA
TAAAGGGC
UFO07306.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14823-RB | 974 | CG14823-RB | 66..418 | 4..356 | 1750 | 99.7 | Plus |
| CG14823-RD | 1108 | CG14823-RD | 66..417 | 4..355 | 1730 | 99.4 | Plus |
| CG14823-RA | 2098 | CG14823-RA | 66..413 | 4..351 | 1725 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7066379..7066730 | 4..355 | 1730 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-27 00:12:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 222..285 | 930..993 | 131 | 71.2 | Plus |
UFO07306.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:54 Download gff for
UFO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14823-RB | 62..418 | 1..356 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:19 Download gff for
UFO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14823-RB | 62..418 | 1..356 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:50 Download gff for
UFO07306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14823-RB | 62..418 | 1..356 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:57:50 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:10:19 has no hits.
