UFO07310.5prime Sequence
968 bp (680 high quality bases) assembled on 2011-06-23
> UFO07310.5prime
CAGTCGACATGCTCCTTACCACCGGATCCTATATTGACCTGCCCACCGAA
ATGTTTCTCAGCCTAAGAGAATCGCCAAACAGCAAGCACAAGTGCATGGA
GTTCCAGTCGCCATTCCCCCCCCGCAACTGTGGTTGGCATACGAACAGTT
TGATCTTGAAACTGGCTTATGGAGCCTACATTTCACAGCCCGGACAAGCC
AAGTGGCTGGATTTCAATATAAATGGAGCAGTCAAGGAGGTGCCAGATGA
GCCTGCCTGTGATAAGTCATCCATCGATCTGCAGATGGTCTACAAGCCTC
GCGCAATCGATCAGCAACCATCAGACATTGAAGATGGCAACTGCAATAGC
GCCTTGGTTAGTTGGACCCTTAGATGTAAAGGCGAAGGCGATGATTGCAA
CGATTTTCAAATCTTTAACACACTATCCATACCAGCAGTTAAGGATTCCA
GCGGCAAGGAACCACTTGGATGCCACTTCATTAAGCTGGAGAACAAGCCA
GACTGCGGTTGCGAAATAATGTCCAAATACGAGTTGATAAGCGCCTGGGT
GCAGTTAAAGCTAATGCGGGCAGAGATGGGACACTGCACACGCATCTCGC
TATGGGATTTTGAGCCAATGCTGGAGGAGAAGCTGACGTTAATTTCGCTG
GAGCAGCAGCTTCATGACTATTATAACACAAGTATGCCGCAGCTACTGTC
CAACTTGTGTGAGTTTTTGAAGCTGCTGGACACGGTACCCGCTGGGAGAT
TACCTGCAGGCGATGCTCACCCAAGTACAAGGATAGTTCCCTGCTGGTGC
ATTGTCACCCAGGAGGCAACGCCACAGAGTTTTTCAGCTACACTAAGCTC
CTACGGAATTCCATCCCCAGCGACCAGCCTTTCTTTACGCAAAGTAACTA
CCTTCCGTTCTCACCCATCCTTCGTGGCCGCCTGCACGAAGAACTTCGTC
TTATTGCCTGGGCTGTTC
UFO07310.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ice2-RC | 2350 | CG10825-RC | 944..1869 | 9..939 | 4170 | 97.2 | Plus |
| Ice2-RA | 2505 | CG10825-RA | 1099..2024 | 9..939 | 4170 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21131314..21132239 | 9..939 | 4015 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:12:28 has no hits.
UFO07310.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:57 Download gff for
UFO07310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10825-RC | 935..1878 | 1..951 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:27 Download gff for
UFO07310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice2-RB | 1011..1954 | 1..951 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:55 Download gff for
UFO07310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice2-RA | 1093..2036 | 1..951 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:55 Download gff for
UFO07310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21131308..21132251 | 1..951 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:27 Download gff for
UFO07310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16957030..16957973 | 1..951 | 96 | | Plus |
