UFO07315.5prime Sequence
1090 bp (971 high quality bases) assembled on 2011-06-23
> UFO07315.5prime
CAGTCGACATGCGCGTCTACCTGGCCCTGCCGCTCCTGCTGCTGGGCATC
GGCCTCAGTTTGGCCCAGTACCAGTATCAAGCGCCCCACCAAACCCTCGC
CCAGCAATTCGCCGACGTGGTGGATGTGGTCGATCCTGCAGAACAATCTA
TCAAAGCAGTGCGACCACCGAAGAGCCGCAATCAGTGCACCGCCAAGCAG
AACTGCTTCTGCGGCACTCCGAATGTCAACCGTATCGTGGGCGGCCAGCA
GGTGCGCTCCAACAAGTATCCTTGGACCGCCCAATTGGTAAAGGGTCGTC
ATTATCCCCGCCTCTTCTGCGGCGGTTCCCTAATCAATGATCGCTATGTG
CTGACCGCCGCCCATTGTGTGCATGGGAACAGGGATCAGATCACCATTCG
CCTGCTCCAGATCGACAGATCCTCCCGGGATCCCGGCATTGTGCGCAAGG
TCGTCCAGACCACTGTGCATCCTAACTACGATCCCAACCGGATTGTCAAC
GATGTGGCGCTGCTCAAGCTGGAGTCCCCTGTTCCACTGACTGGAAACAT
GCGTCCAGTCTGTCTGCCCGAGGCCAATCATAACTTTGATGGCAAGACCG
TGAGTACAAGTCTTGATTTATGTGCTAAACTGTATTTCCTTTTATGTAGG
CCTGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGGAGTCCAAGCGAGCTCGATTATCAAATTACGCCCG
CCCTGCCACTCATCGCAGTACTGTTGTAATTCACATTAAGCATTCTGCCG
ACATGGAAGCCATCCACAACGGCATGATGAACCTGAATCGCAGCGGCCAT
CAGCACTTGTCGCCTTGCGTGTATATTTGCCATGTGTAAAATGGGGGGCG
AAAAGTTGTCGTATGCACGTTAAATTCGACCTGTGTGAAA
UFO07315.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-RB | 1399 | CG3355-RB | 88..735 | 9..656 | 3240 | 100 | Plus |
| CG3355-RA | 1096 | CG3355-RA | 36..627 | 9..600 | 2960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4651765..4652213 | 208..656 | 2245 | 100 | Plus |
| 2L | 23513712 | 2L | 4651490..4651688 | 9..207 | 995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:12:33 has no hits.
UFO07315.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:57 Download gff for
UFO07315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RB | 80..746 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:28 Download gff for
UFO07315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RB | 80..746 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:57 Download gff for
UFO07315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RB | 80..746 | 1..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:57 Download gff for
UFO07315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4651482..4651688 | 1..207 | 98 | -> | Plus |
| 2L | 4651765..4652224 | 208..666 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:28 Download gff for
UFO07315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4651482..4651688 | 1..207 | 98 | -> | Plus |
| arm_2L | 4651765..4652224 | 208..666 | 99 | == | Plus |
