UFO07317.5prime Sequence
1069 bp (971 high quality bases) assembled on 2011-06-23
> UFO07317.5prime
CAGTCGACATGTCTAAAAAGCTGGTATTGTTGCTATTGTTTGTTGCCACT
GTCTGTGCCCACAGGAATCGCAATCGTACGGCTCATCATGGTGGTGGTCC
CAAGGACATCATTGTAAATGGCTATCCAGCCTACGAAGGCAAGGCACCAT
ATGCTGTGGGCCTGCGAATGAACAATGGAGCCGTGGGCGGAGGTTCCGTA
ATTGGAAACAATTGGGTCCTGACCGCTGCCCATTGCCTGACCACCGATTC
CGTGACCATACACTACGGCTCGAATCGTGCCTGGAACGGTCAGCTTCAGC
ATACGGTGAACAAGAATAACTTCTTTCGCCATCCAGGATATCCCAATAGC
GCTGGTCACGACATCGGACTCATTCGCACCCCGTACGTCAGCTTCACCAA
TCTGATCAACAAAGTTTCGCTGCCCAAGTTCAGCCAAAAAGGTGAGCGTT
TCGAGAACTGGTGGTGCGTGGCCTGCGGCTGGGGAGGAATGGCCAATGGA
GGATTGGCCGACTGGCTGCAATGCATGGACGTGCAAGTCATTAGCAACGG
AGAATGCGCCAGGTCATACGGATCGGTGGCCAGCACTGATATGTGCACCC
GGGCCACCGATGGCAAGTCCGTGTGCGGTGGCGACTCTGGCGGAGCACTG
GTCACTCACGACAATCCCATTCAAGTGGGCGTTATCACCTTTGCATCCAT
GGGCTGCAAGTGTGGACCATCGGGCTACACCCGTGTGTCCGATCACTTGG
ACTGGATCCGAGAGAAGTCGGGAATTGCCTATTACGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACACTAGCCTAGAGATCCTGGTCATGACTAGTGCTT
GATTCTCACATAAAAACGCCCGGCGCACCGAGCGTTCTGAACAATTCAGA
TGGAGTTCTGAGTCATTTACTGATTTATCACAGAGTCAGCCGAGACTCGA
TATTCAAATTACGCCACGCCTGCATCTATACGCAGTACTTGTTTGTTATT
TTCTATTGTGTCTGCGACT
UFO07317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8329-RA | 910 | CG8329-RA | 15..792 | 8..785 | 3860 | 99.7 | Plus |
| CG18179-RA | 870 | CG18179-RA | 400..800 | 360..760 | 460 | 74.9 | Plus |
| CG18180-RA | 901 | CG18180-RA | 491..789 | 462..760 | 370 | 75.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9638126..9638903 | 8..785 | 3860 | 99.7 | Plus |
| 3L | 28110227 | 3L | 9639670..9640070 | 360..760 | 460 | 74.3 | Plus |
| 3L | 28110227 | 3L | 9641503..9641801 | 462..760 | 355 | 74.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:12:42 has no hits.
UFO07317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:58 Download gff for
UFO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8329-RA | 15..795 | 8..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:33 Download gff for
UFO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8329-RA | 15..795 | 8..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:01 Download gff for
UFO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8329-RA | 15..795 | 8..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:01 Download gff for
UFO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9638126..9638906 | 8..789 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:33 Download gff for
UFO07317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9631226..9632006 | 8..789 | 99 | == | Plus |
