UFO07325.5prime Sequence
951 bp (748 high quality bases) assembled on 2011-06-23
> UFO07325.5prime
CAGTCGACATGGACACTGTCTATGGGACAAAGAAATACTTCCAGAGTTTA
TCCGGCGTGAGTGATATATACAGGGCGCAGACATGTCGGCAAATGAGCGC
GGACTATACATACCAGAACACAGTTGGCCGGAGGTCTCAGCTGGGGGCAT
ACTACCACATGAACAAACAGCCCTCGTACACCAATGAGCACAGTCTGAAC
AGTCAGTATGGATACAATACGTGGGGCATATGGCGGGATGGCAGGAACAT
CGCCCCATCCACCTTCTCGGCCAAGACGCACACGCAGTACCCCAAGAATC
GATCATTCAGCATTATCCTTACAACGGCTGCATTTATCGTCCTGCTTACG
GTCATCTCAATCGCCGGATTGGCCTTTTACTTCAGCTCTATAAAAACCAA
TCTGGAGGATCCTGTCATGGGCTTTGAGGGTTCCTTCCGCATTGCCAAAG
GGGATCTCTTCTCCACTGGTTTGAAGTACAACCACACCACCACCTACAAA
CAGAAAATCGATTTCTATAAGAGATTCGTGGAGCGTTCCATGATGGACAA
TGGATTGCAGCCACTGCGCACCGATGTCTGGGGCTTTGGTGACGGTCCAT
TAATAAAGGTCTCATTCCGCGTATTCCTCGATGTCCGTAAACTGCCGCAA
AACATCCTGAGTGTCGAGGAGTATACAGGAGCTCTGTCTGAACTCGTCAA
TCTTTACGTCCACTTTGAACGATCGTGAGTCACGATATGAGACAGTGTGG
TCTGACGTATAAGACACTGCATACACATGAACTCTGAAGACACGACCCAT
ACACACACCCACAACTGGACTCCAAACACAGGAGCTAAGTTAGCTAACAC
GCAACGAACCCTCCACTACTGCAGTGACTCAGACACACAAAGCACCGGTC
GCGAGTCAACTCATTGTTCGACACCCAAATCCCGGTGTGTGCTGTGTGAC
T
UFO07325.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1273-RB | 4187 | CG1273-RB | 282..948 | 9..675 | 3335 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4273780..4274096 | 95..411 | 1585 | 100 | Plus |
| 3L | 28110227 | 3L | 4274160..4274397 | 412..649 | 1190 | 100 | Plus |
| 3L | 28110227 | 3L | 4272111..4272197 | 9..95 | 435 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:13:01 has no hits.
UFO07325.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:01 Download gff for
UFO07325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1273-RB | 280..961 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:42 Download gff for
UFO07325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1273-RB | 282..963 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:09 Download gff for
UFO07325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1273-RB | 282..963 | 9..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:09 Download gff for
UFO07325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4272111..4272197 | 9..95 | 100 | -> | Plus |
| 3L | 4273781..4274096 | 96..411 | 100 | -> | Plus |
| 3L | 4274160..4274397 | 412..649 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:42 Download gff for
UFO07325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4272111..4272197 | 9..95 | 100 | -> | Plus |
| arm_3L | 4273781..4274096 | 96..411 | 100 | -> | Plus |
| arm_3L | 4274160..4274397 | 412..649 | 100 | -> | Plus |
