Clone UFO07329 Report

Search the DGRC for UFO07329

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:73
Well:29
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptL-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07329.5prime Sequence

977 bp (702 high quality bases) assembled on 2011-06-23

> UFO07329.5prime
CAGTCGACATGTTGATCTCGTGCAAATGCTCGAATTTCGTTGCTTCGACT
TCGAAATTGCAGCGCAGCAACAGCAGCAGCGGCGCAGGGGGCCGCGTGGG
CGGTGCAGAGGTCGCCAGCGGCGAGGTACCCACCGCGATCCTCCTGTCGC
AGGTGTTCCAGCAGAAGTATCCTCTGGACTTCGTCTTCTACAGCCATATC
ATGGAGTTCTTTAAGCACGCCTATGGTCCCATTCCAGACCTCACCGTGGC
TGTGATTAATCAGCGGGAGCTGTTGTATGGTCTCACCCTGGAAGCCGCTG
GCCAGAGTTGGCAGCTGAGCCTGTGCATCAACTGCAAGGAGGTGCTATGC
GCCAAGCGATTGACGGCGGGCGCCGGGGCCACGCCCACTCTCTACCTCAT
CAACTGCACGCTGTTGACCAGCAGCGAGGAGCTGGCTCAACGGAAGTCCA
ACAAAGCCTTCTCGGAGACCTTCGAGCTGCTGATCATGGATCACACAGGC
AGTGACTCTGGATCCACTCGACCCACCAGTGGACTATCCAACTCCGCATC
GAGTCTAAGCATCGGATCCCTGTCTTCGAATCCCACTGATGCCAGGGTGC
AGAGATTGAGAATGATACAAGCGCACCAGCAGGCGCGATTGCAGGAGGAG
ATTGTGGAGCAATGAAGATCGAGGGAACCGATCATTCAGTATAACATTTC
GGAAATCGGTCAGATGCCGTGTATCAAGTATCTGGTGCCGACAGCTCGAC
TATCGTCTGCATGTCCTGCCTGTGGCGCATCAGCGAATGGATGCCGCGAG
ACACACACAGCGCGGCTGATGTGACCCCCCCCCATAGTGCCTCCCACTCT
ACGTGACACGCGACACGTGTGCCACAACGACGTGAGCACGACACACGAGC
CCAAGTCCGTGCAGAAGCCCTGACCGCCCCCAAGCCCCTGCGGAACCCCT
CGCCACACCGGGGGGGCCCCCAATGAC

UFO07329.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
L-RA 2632 CG10109-RA 394..1045 8..659 3260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14495152..14495592 219..659 2205 100 Plus
2R 25286936 2R 14481580..14481791 8..219 1060 100 Plus
Blast to na_te.dros performed 2014-11-27 00:13:12
Subject Length Description Subject Range Query Range Score Percent Strand
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 157..214 64..121 110 65.5 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 9187..9244 64..121 110 65.5 Plus

UFO07329.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:02 Download gff for UFO07329.5prime
Subject Subject Range Query Range Percent Splice Strand
L-RA 378..1047 8..673 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:47 Download gff for UFO07329.5prime
Subject Subject Range Query Range Percent Splice Strand
L-RA 394..1063 8..673 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:12 Download gff for UFO07329.5prime
Subject Subject Range Query Range Percent Splice Strand
L-RA 394..1063 8..673 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:12 Download gff for UFO07329.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 14481580..14481790 8..218 100 -> Plus
2R 14495152..14495610 219..673 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:47 Download gff for UFO07329.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10369085..10369295 8..218 100 -> Plus
arm_2R 10382657..10383115 219..673 99 == Plus