UFO07329.5prime Sequence
977 bp (702 high quality bases) assembled on 2011-06-23
> UFO07329.5prime
CAGTCGACATGTTGATCTCGTGCAAATGCTCGAATTTCGTTGCTTCGACT
TCGAAATTGCAGCGCAGCAACAGCAGCAGCGGCGCAGGGGGCCGCGTGGG
CGGTGCAGAGGTCGCCAGCGGCGAGGTACCCACCGCGATCCTCCTGTCGC
AGGTGTTCCAGCAGAAGTATCCTCTGGACTTCGTCTTCTACAGCCATATC
ATGGAGTTCTTTAAGCACGCCTATGGTCCCATTCCAGACCTCACCGTGGC
TGTGATTAATCAGCGGGAGCTGTTGTATGGTCTCACCCTGGAAGCCGCTG
GCCAGAGTTGGCAGCTGAGCCTGTGCATCAACTGCAAGGAGGTGCTATGC
GCCAAGCGATTGACGGCGGGCGCCGGGGCCACGCCCACTCTCTACCTCAT
CAACTGCACGCTGTTGACCAGCAGCGAGGAGCTGGCTCAACGGAAGTCCA
ACAAAGCCTTCTCGGAGACCTTCGAGCTGCTGATCATGGATCACACAGGC
AGTGACTCTGGATCCACTCGACCCACCAGTGGACTATCCAACTCCGCATC
GAGTCTAAGCATCGGATCCCTGTCTTCGAATCCCACTGATGCCAGGGTGC
AGAGATTGAGAATGATACAAGCGCACCAGCAGGCGCGATTGCAGGAGGAG
ATTGTGGAGCAATGAAGATCGAGGGAACCGATCATTCAGTATAACATTTC
GGAAATCGGTCAGATGCCGTGTATCAAGTATCTGGTGCCGACAGCTCGAC
TATCGTCTGCATGTCCTGCCTGTGGCGCATCAGCGAATGGATGCCGCGAG
ACACACACAGCGCGGCTGATGTGACCCCCCCCCATAGTGCCTCCCACTCT
ACGTGACACGCGACACGTGTGCCACAACGACGTGAGCACGACACACGAGC
CCAAGTCCGTGCAGAAGCCCTGACCGCCCCCAAGCCCCTGCGGAACCCCT
CGCCACACCGGGGGGGCCCCCAATGAC
UFO07329.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
L-RA | 2632 | CG10109-RA | 394..1045 | 8..659 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14495152..14495592 | 219..659 | 2205 | 100 | Plus |
2R | 25286936 | 2R | 14481580..14481791 | 8..219 | 1060 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:13:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 157..214 | 64..121 | 110 | 65.5 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9187..9244 | 64..121 | 110 | 65.5 | Plus |
UFO07329.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:02 Download gff for
UFO07329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
L-RA | 378..1047 | 8..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:47 Download gff for
UFO07329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
L-RA | 394..1063 | 8..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:12 Download gff for
UFO07329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
L-RA | 394..1063 | 8..673 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:12 Download gff for
UFO07329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14481580..14481790 | 8..218 | 100 | -> | Plus |
2R | 14495152..14495610 | 219..673 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:47 Download gff for
UFO07329.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10369085..10369295 | 8..218 | 100 | -> | Plus |
arm_2R | 10382657..10383115 | 219..673 | 99 | == | Plus |