UFO07330.5prime Sequence
932 bp (670 high quality bases) assembled on 2011-06-23
> UFO07330.5prime
CAGTCGACATGAAGCATTGTTGGGCAATCGGAACTCTACTCTTAGCAAGT
GTCCTTATGGGCAATGCCTGTCGACATACTTGCGTTACCCGGAATTTTTG
TTTGTATGAGGAACCAACATTTGATTACCGCTCCAGTAATTGCGGCAATA
CCAAAATTTGCTGTGCAGTTCTACGAAAGCCTGGAGGTACGGTTTTAATT
GAACCAAATGGCCCCGAAGATGATAAGGTTGGAGTAAACGGAATAAATGC
ACAACTATCGCCTACACGCGAACTCACTAGAGATCGCCCAAATACCATTG
AGTCACAAGTAAAGGAAATCAACGACTTCAGTGGGCGTCCAACCAACAAC
GAAAGGAATCCAGCAACCGAACCGAACAACGGCGGGTATACAACACCCAA
CGGTGGGTATCCAGTAAACAACGGTGGGTATCCAGTAAACAACGGTGGGT
ATCCATCAAACAACGGTGGGTATCCATCAAACAACGGTGGGTATCCAGTA
AACAACGGTGGGTATCCAGTAAACAACGGTGGGTATCCAGCAAACAACGG
TGGGTATCCAGCAAACAACGGTGGGTATCCAACAACCAACGTTGGAAATC
CAACAAACAACGGAGGGAACCCGATCATTGAACAACCAGACAAAGGCAAT
GCTCTCCATAGAATGCATACGGCATGGTAGACGATGGGCTCAGTAGTCAT
ACCACATATAGTGGGCTGTAGGTAGACCACGCATTGTGCTGCAATTGGTA
GAAGGAAAAACATTGATCAAGACGACCAACTCAATATCCCTGGGGCTGTT
GCTATTTTTCACAGTGGACAGTAACTTGGCTGGCGGATCCTGATTCAACC
AAATGTCTTTCTAACATTAGCTCACCGGGTAATTACATCGAACGACTGTG
TCAGGCTGCATGGACTAATCGTCAGAATTTTG
UFO07330.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:13:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
SPH93-RA | 1587 | CG6639-RA | 26..643 | 7..624 | 3090 | 100 | Plus |
SPH93-RA | 1587 | CG6639-RA | 394..594 | 417..617 | 660 | 88.6 | Plus |
SPH93-RA | 1587 | CG6639-RA | 457..673 | 375..591 | 620 | 85.7 | Plus |
SPH93-RA | 1587 | CG6639-RA | 394..573 | 438..617 | 615 | 89.4 | Plus |
SPH93-RA | 1587 | CG6639-RA | 478..700 | 375..597 | 605 | 84.8 | Plus |
SPH93-RA | 1587 | CG6639-RA | 394..552 | 459..617 | 555 | 89.9 | Plus |
SPH93-RA | 1587 | CG6639-RA | 749..903 | 740..892 | 545 | 92.4 | Plus |
SPH93-RA | 1587 | CG6639-RA | 394..531 | 480..617 | 450 | 88.4 | Plus |
SPH93-RA | 1587 | CG6639-RA | 499..636 | 375..512 | 450 | 88.4 | Plus |
SPH93-RA | 1587 | CG6639-RA | 394..510 | 501..617 | 360 | 87.2 | Plus |
SPH93-RA | 1587 | CG6639-RA | 520..636 | 375..491 | 360 | 87.2 | Plus |
SPH93-RA | 1587 | CG6639-RA | 394..489 | 522..617 | 270 | 85.4 | Plus |
SPH93-RA | 1587 | CG6639-RA | 541..636 | 375..470 | 270 | 85.4 | Plus |
SPH93-RA | 1587 | CG6639-RA | 562..678 | 375..491 | 180 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:13:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 17455207..17455655 | 624..176 | 2245 | 100 | Minus |
2L | 23513712 | 2L | 17455726..17455898 | 179..7 | 865 | 100 | Minus |
2L | 23513712 | 2L | 17455165..17455414 | 624..375 | 815 | 88.4 | Minus |
2L | 23513712 | 2L | 17455256..17455456 | 617..417 | 660 | 88.6 | Minus |
2L | 23513712 | 2L | 17455177..17455393 | 591..375 | 620 | 85.7 | Minus |
2L | 23513712 | 2L | 17455277..17455456 | 617..438 | 615 | 89.4 | Minus |
2L | 23513712 | 2L | 17455150..17455372 | 597..375 | 605 | 84.8 | Minus |
2L | 23513712 | 2L | 17455298..17455456 | 617..459 | 555 | 89.9 | Minus |
2L | 23513712 | 2L | 17455214..17455351 | 512..375 | 450 | 88.4 | Minus |
2L | 23513712 | 2L | 17455319..17455456 | 617..480 | 450 | 88.4 | Minus |
2L | 23513712 | 2L | 17454953..17455101 | 887..740 | 415 | 92.7 | Minus |
2L | 23513712 | 2L | 17455214..17455330 | 491..375 | 360 | 87.2 | Minus |
2L | 23513712 | 2L | 17455340..17455456 | 617..501 | 360 | 87.2 | Minus |
2L | 23513712 | 2L | 17455214..17455309 | 470..375 | 270 | 85.4 | Minus |
2L | 23513712 | 2L | 17455361..17455456 | 617..522 | 270 | 85.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:13:17 has no hits.
UFO07330.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:03 Download gff for
UFO07330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6639-RA | 14..637 | 1..624 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:49 Download gff for
UFO07330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6639-RA | 20..643 | 1..624 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:13 Download gff for
UFO07330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
SPH93-RA | 20..643 | 1..624 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:13 Download gff for
UFO07330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 17455207..17455651 | 180..624 | 100 | <- | Minus |
2L | 17455726..17455901 | 1..179 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:49 Download gff for
UFO07330.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 17455726..17455901 | 1..179 | 97 | | Minus |
arm_2L | 17455207..17455651 | 180..624 | 100 | <- | Minus |