UFO07336.5prime Sequence
1082 bp (952 high quality bases) assembled on 2011-06-23
> UFO07336.5prime
CAGTCGACATGAGACACAATCGACTGAAGGTCCTGATCCTGGGACTCGTC
CTCCTGCTGACATCTTGTCGAGCGGATGGACCGCTGCACAGTGCGGATCA
CGGCATGGGCGGAATGGGCATGGGTGGTCACGGCCTGGACGCGAGTCCCG
CACCCGGTTACGGAGTGCCAGTCATACCCAAGGATCCCAATCTGCGATGC
GAGGAGATCACCATACCAATGTGTCGGGGCATTGGCTACAACATGACATC
CTTCCCCAACGAAATGAACCATGAGACCCAGGACGAAGCGGGCCTGGAGG
TGCACCAGTTCTGGCCCCTGGTGGAGATCAAATGCTCGCCGGACCTCAAG
TTCTTCCTGTGCAGCATGTACACGCCCATCTGCCTGGAGGATTACCACAA
GCCGCTGCCCGTTTGCCGGAGTGTCTGCGAGAGAGCCCGCTCGGGATGCG
CACCCATCATGCAGCAGTACAGCTTCGAATGGCCGGAGAGAATGGCGTGC
GAGCACTTGCCTCTTCATGGTGACCCCGACAATCTGTGCATGGAACAGCC
CTCGTACACGGAGGCTGGCAGCGGTGGCAGCTCGGGCGGATCGGGTGGCT
CTGGCAGCGGTTCCGGCTCCGGCGGCAAACGGAAGCAAGGAGGCAGTGGC
TCGGGCGGCAGTGGGGCCGGCGGCAGCAGCGGTTCCACCTCAACGAAGCC
GTGCCGCGGACGCAATTCAAAAAACTGCCAAAATCCCCAAGGAGAAAAGG
CAAGCGGAAAAGAGTGCAGCTGCTCGTGCCGCTCCCCACTCATCTTCCTG
GGGAAAGGAGCAGCTGCTGCAGCAGCAGTCGCAGATGCCCATGATGCCCC
ATCCACACCACTGGTACATGAACCTCACTGTCCAAAGGATCGCCGCGTGC
CAACTGCGCATACCGTGCAAGCGGCCCTTCTTCAGCACGCCGAAAGGATT
TCGCGCCTTCTGGATCGCTGTGTCGGGACTGTGCTTCTGCAGCACGCTCA
TGACCCTTACACATCATCATCGACACCGGAATGTTTAGTACCCGGACGCC
CATTGTCCTTCCTCTCCGCTGCTACTTCATGT
UFO07336.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:12:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz2-RG | 5696 | CG9739-RG | 385..1470 | 9..1081 | 4890 | 97.6 | Plus |
| fz2-RF | 4448 | CG9739-RF | 1060..2145 | 9..1081 | 4890 | 97.6 | Plus |
| fz2-RE | 4345 | CG9739-RE | 957..2042 | 9..1081 | 4890 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:12:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19145201..19146286 | 1081..9 | 4515 | 97.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:12:57 has no hits.
UFO07336.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:20:00 Download gff for
UFO07336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RC | 1049..2140 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:10:40 Download gff for
UFO07336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 951..2042 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:58:07 Download gff for
UFO07336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz2-RE | 951..2042 | 1..1082 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:58:07 Download gff for
UFO07336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19145199..19146292 | 1..1082 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:10:40 Download gff for
UFO07336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19138299..19139392 | 1..1082 | 97 | | Minus |
