UFO07340.5prime Sequence
1104 bp (936 high quality bases) assembled on 2011-06-23
> UFO07340.5prime
CAGTCGACATGGACAGCGCCGATGAGCAGCTGCAGCTGGATCTGGACAGG
ATATCGATGGAGAGTCGCCAGGCCAGCAGTTTCGATGACCTCATCGAGCT
GACCAACAACTCGGAGCGTCTGATGGCCAGAGTCAATTCCAGCTTGGATG
ACCTAAACACCGCCCTCGACAACCTGGAGGCTCGAACGGACCGGGTTCTG
GTCGAGATTCGGAGGCTAATCAGCTCGGAAATGCCGGCACAAGGTCCGCA
CGATGGATGTGGCGATCCAGATGCCAGGGCGGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAACA
TATTCTCAATAAACCCTTTAGGAATAGCCAGTTTCACCGTAACACGCACA
TCTTGCGATATATGTGTAGAACTGCCGGAATGTCGTGTATCACTCAGAGC
GTGAAACGTTCATTTGCTCTGGAAACGTGTACAGGTGACATATCCATATC
CCACTCACGCTTCATGCTACGATTCGATGACATCTCAGCGGCAGATGGAT
AAGCGAAAACTGGCTATTTCTTCGTCTAAAGCTATTCACTGACGTTGTTA
GAATGCACGACGAAGCCCAAGTCTACAGCATGATATACGGCATCGATTCT
ACTCTACTGTCATCTACAATAAACGTAATACTAGTGCAGATAGTGAAAGT
CCAT
UFO07340.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13838-RA | 429 | CG13838-RA | 93..365 | 9..281 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23042333..23042605 | 9..281 | 1365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:41:43 has no hits.
UFO07340.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:31 Download gff for
UFO07340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 85..370 | 1..287 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:56:54 Download gff for
UFO07340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 85..370 | 1..287 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:31 Download gff for
UFO07340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13838-RA | 85..370 | 1..287 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:31 Download gff for
UFO07340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23042325..23042605 | 1..281 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:56:54 Download gff for
UFO07340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18868047..18868327 | 1..281 | 98 | == | Plus |
