UFO07353.5prime Sequence
932 bp (770 high quality bases) assembled on 2011-06-23
> UFO07353.5prime
CAGTCGACATGTTGCCGCATATAAGTGCCGACGAGGCACAGCCGTCTATG
TCGCGAAAGGTGTACATCAATCCGAATTTTCAGCTGCAAGGTCAAACGGC
GCATCAGCTGCCGTTCCAAGTGCCCTTCCAGGCGTTCCAGGCGCCACTGC
AGCCTCAGCCCGCGATCCATATCAATCCGCACTTTCTGAATCGCCAGCGG
GCCATGTACGACCAATACCAGCGGGAGCAGCAGGAGCAGCTTATGATGCA
ACAAGTTTCCGCCTCGCACTATCGACTGGATCCAACGATACACCTACTGG
CGACTCCACCTCCTCCGCCCGCCAAGATCATCAGCAAAGTGAGCACGTGT
CTCGTGCGCAAGCCATCAGTGGTGGCAAGTGGTCCGGCGGTGAAGCTCGC
TGCTTCAGTACCTGTGCCCACTGTTTCCAGCCTGGTGCAGCCTCCATTGG
TAAGCATTTCCAAGCGGAAAATTGTGAGGCAAGGAGCATTGAAAGCAGCG
CCAGCGGTTGCTGCCCTCCATCCTCCTCCACCTGCTAAACGCACTAGGTA
CAAATTAGTGCGTTCCATATCACTTACCTGCACACCGCTGGTCAAAAAGC
GTCGTCCTCTACGCGAGTTTGTGGGCCAGTACGCCCTGAGACGCACCAAT
GAAGCGCAGCCCAACAGAAAACTGAGCTCCAAGCCGCAGGCGCTGAAGCT
GGGCGTTACATCCTACTGTACTCCGGGTGAAAGTACGAACAATACAGTGT
GATCTCGAGACACAACAATGCATGCGACCCCCGAATCTACCGCCGATCCT
AGGCACACACAGCACGATTCAGATACATCGTACAACTCATGTTGCAGTCT
GGCAGTTCGCTCACACGCGACAAATCTGTCGGTACCACCAAGCTTTTGAA
TGAGCAAGGAGGACAGTTAACAAGAGCAGATG
UFO07353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZC3H3-RA | 2042 | CG6694-RA | 116..819 | 5..708 | 3505 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:41:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8508977..8509648 | 676..5 | 3345 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:41:56 has no hits.
UFO07353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:33 Download gff for
UFO07353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZC3H3-RA | 97..803 | 1..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:58:24 Download gff for
UFO07353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZC3H3-RA | 113..819 | 1..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:37 Download gff for
UFO07353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ZC3H3-RA | 113..819 | 1..708 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:37 Download gff for
UFO07353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8508847..8508878 | 677..708 | 100 | <- | Minus |
| 3L | 8508977..8509651 | 1..676 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:58:24 Download gff for
UFO07353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8501947..8501978 | 677..708 | 100 | <- | Minus |
| arm_3L | 8502077..8502751 | 1..676 | 99 | | Minus |
