UFO07383.5prime Sequence
957 bp (755 high quality bases) assembled on 2011-06-23
> UFO07383.5prime
CAGTCGACATGTCCACCGTGAGCGACCCCAACAGTAGCAATCCGCCGGAG
AGTGCGGGGAACATTCGGCCGGAGCCCATTTTCCGGGAAATCAATGCGGA
GCAGACCGACGAGATAGTGGAGGTCGAATCCGCCTGCATGAACTGCTTCG
AAACGGGAGTCACTCGGCTGCTGCCCACCAAGATACCCTTTTTTCGCGAG
GTGGTGCTCATGTCCTTCAAGTGCGACCACTGCGGCCACATCAACAACGA
GATGCAGTCGGCATCGGAGATCCAAAAGTCCGGCATTCGCATCGAACTGC
GAGTGCAATCCGTGGCTGATCTCAATCGGCGCGTGGTGCGCTCGGATAAC
TCCAGCATCAGCATACCGGAGATCGAGCTAGAGATTCCGGTGCAGTCGCA
GAAGGGCGAGGTGACCACCGTCGAAGGCATCATCGAGCGGACGATAGCCG
GCTTGTCGCAGGATCAGGAGAAGCGGCGCATCGATCATCCGGAGACAGCT
GCTTCAATTGAAAAGTACATCGAGCGATTGCACCGCCTAAAGGAGGTGAC
AACACCCTTTCAAGTGCTTCTCGAGGACATATCCGGCAATAGTTTCATCG
AGAATCCCCTGGCACCTGCCGCCGATCCGCAGCTAAAGACTTCGTACTTC
ACACGCAGCCAGCAGCAGAACGAGCAATTGGGCCTGTACGAGCAGAATCA
CGAGAGAGACTGTGAGCGTGCAGCCTGCATGGTCGCGCATGTCGTCCACA
TGCACGAGGCTGAGCACTGAGTGCACACGATCAGAGGGCTGCCGTGGGTG
GCCAGCACATGATCGGGTGAGCAGTGACTCCGCATGAAGAGTGCTGTCTA
GCGACTGACTGCTCACGCCAGGCCAGCTGGGACCACGAGCGGTGTGGACT
GCGCTCGACCAACGCACAAGCATCTGCTAGTCATACGTACGTGGACGGAA
TGATGAA
UFO07383.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:42:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zpr1-RA | 1853 | CG9060-RA | 116..812 | 8..704 | 3485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:42:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9161301..9161975 | 682..8 | 3375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:42:13 has no hits.
UFO07383.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:35 Download gff for
UFO07383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zpr1-RA | 58..766 | 1..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:04 Download gff for
UFO07383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zpr1-RA | 107..815 | 1..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:44 Download gff for
UFO07383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zpr1-RA | 107..815 | 1..708 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:44 Download gff for
UFO07383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9161162..9161187 | 682..708 | 96 | <- | Minus |
| X | 9161302..9161984 | 1..681 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:04 Download gff for
UFO07383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9055195..9055220 | 682..708 | 96 | <- | Minus |
| arm_X | 9055335..9056017 | 1..681 | 99 | | Minus |
