UFO07394.5prime Sequence
1081 bp (899 high quality bases) assembled on 2011-06-23
> UFO07394.5prime
CAGTCGACATGGCATTCCGCCAGTCGGAGCACGAGATGAGCGTCACCTCA
CTCGATTCAAGCGTCGAACTGAGATCGCGTTCGCCATCGCCGCAGGTCTT
CAATCCGCGCAAGCTCCGCTTCGCCGATGATGACTTTGACAAGGACACGC
CCGAGGGAGCGAGTCCGCAGCATCCCCTTCAGCAGCGGCCGAAGCTATCC
TCCGGTGAGGAGCAGCAGCTGGACAGTAAGATAGGCAAAGAAGGCGGCGA
CGGGGACGTGTCCATGTCGCCGCCATGCCAAAAGGTGCGGGCCCTGCGAC
TCTTTAGCACACCGGCCACTCCAAAGACCATCCTGCAGAAGTCGACGACG
CAGTGCAGCAACCATCTGTCGGCGGCAGCAGCGGCAGTGAATGCCTCCAG
GCGCAGCGACGACCTCTTCCGCCTGTCAGAGCGCCCGCGATCTCTGCCAC
TGCACAACCGCAAACTGCCCACCCAGGACACGGCAAATGTGAACCCCTTC
ACGCCAGATAGCCTCATGGCTCACAATAAGAAGCGCTGTCGCACGCAATT
CGGACGCGAAAACCTCAACCTGAACGTGAATGCTATGCAAAAGTATTTGC
TCAGTGATGCCTGCGACGACGATGTGACGGAGGAGGCGGGCGACTCGATG
CGCGAAATCCACCAGCAGGCACCCAAGCGGCTGGCCCTGCACGACACGAA
CATCAGTCGCTTCAAGCGGGAGTTCATGCAAGTCAACGTAATCGGCGTTG
GCGAGTTCGGTGTGGTGTTCCAATGCGTCAATCGACTAGATGGCTGCATA
TATGCGATTAAAAGAGTAAGAGCCGTGGCAGCAGTTCTTTCGAAAGAGAG
CCTGACGAGTCTGGCCCTGTGATGGCAGCCGTACTGTAAACATCCCTGGC
GAGCACTTGTGTCAATGATCGGAGTGACTGACCCCTCAACTTGTGTACAC
AGTGTCAGATGAAAGCTACTATCTCATGCTGGCTGTACACATCCTGTCAG
CATGGAGACGCGAAAGAGTGCGTGACCTGATGTCATCGCTGTCCTAATGG
ATTCCAATCCATATACTCGATTCGACTAGCG
UFO07394.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wee1-RB | 2652 | CG4488-RB | 212..1060 | 9..852 | 4120 | 99.4 | Plus |
| Wee1-RA | 2399 | CG4488-RA | 212..1060 | 9..852 | 4120 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6913425..6913927 | 511..9 | 2515 | 100 | Minus |
| 2L | 23513712 | 2L | 6912979..6913281 | 813..511 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:42:38 has no hits.
UFO07394.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:39 Download gff for
UFO07394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wee-RA | 203..1077 | 1..867 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:17 Download gff for
UFO07394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wee-RA | 204..1078 | 1..867 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:57 Download gff for
UFO07394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wee1-RA | 204..1078 | 1..867 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:57 Download gff for
UFO07394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6912940..6913281 | 511..848 | 98 | <- | Minus |
| 2L | 6913426..6913935 | 1..510 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:17 Download gff for
UFO07394.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6912940..6913281 | 511..848 | 98 | <- | Minus |
| arm_2L | 6913426..6913935 | 1..510 | 99 | | Minus |
