UFO07395.5prime Sequence
576 bp (573 high quality bases) assembled on 2011-06-23
> UFO07395.5prime
CAGTCGACATGGAAGCCCGGCCAGCGAAACGCTCCACAGCGGCCTCCGTC
TTCCGGTCGCATCACATGCCGCGGGAGTCGGATCTGGTGGACATCGGCAG
CGATGCCTCGCTGTACTGCGGCTCCGACGGGGAGTCCAGTCAGGCCCAGT
CCACATCCACATCCACTCCGAACCCGCAAACGAGTTCCGACCAGGATCTG
GACCAGCCTCAGCCAACACCTCGCGCGGCACCGAGAGCATCGGCCTCCAA
TAATCCGCCAACACCCAAGCCACAACAGGCTATCAGGTCATCAAAAGTGC
TTCCAAGTGCAAACTCCACGCTGTCACGATCCAGACAGCGGCTCATCAAA
GTGGACTTCTCCAAGTTTCAGGACGACGATCTCTTCTACGATGAGAACAG
CATCAGCAGCTCCCACTCCACAGCGGCCACCCACCAGCATCATCCATATT
TCGCCGAGATGCACCGCTGCTCGCAGCCCAAGATGCCGCCGTATCCATTC
GGTGGCTACATGGTGCCCTATCAGGCACGACAAGATTGCCGGGAGACGGC
GTCGCTGATGCGGCCCCGACGCACAA
UFO07395.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:42:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spir-RC | 3437 | CG10076-RC | 342..910 | 8..576 | 2785 | 99.3 | Plus |
| spir-RG | 2669 | CG10076-RG | 2075..2354 | 297..576 | 1355 | 98.9 | Plus |
| spir-RF | 4875 | CG10076-RF | 2069..2348 | 297..576 | 1355 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:42:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20342192..20342481 | 8..297 | 1435 | 99.7 | Plus |
| 2L | 23513712 | 2L | 20343740..20343947 | 369..576 | 995 | 98.6 | Plus |
| 2L | 23513712 | 2L | 20343597..20343673 | 296..372 | 385 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 23:42:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| invader4 | 3105 | invader4 INVADER4 3105bp | 443..477 | 218..253 | 105 | 80.6 | Plus |
UFO07395.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 13:42:40 Download gff for
UFO07395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spir-RC | 340..906 | 8..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:00:20 Download gff for
UFO07395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spir-RC | 342..908 | 8..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:59 Download gff for
UFO07395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spir-RC | 342..908 | 8..574 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:49:59 Download gff for
UFO07395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20342192..20342481 | 8..297 | 99 | -> | Plus |
| 2L | 20343599..20343672 | 298..371 | 100 | -> | Plus |
| 2L | 20343743..20343945 | 372..574 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:00:20 Download gff for
UFO07395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20343599..20343672 | 298..371 | 100 | -> | Plus |
| arm_2L | 20342192..20342481 | 8..297 | 99 | -> | Plus |
| arm_2L | 20343743..20343945 | 372..574 | 98 | | Plus |
