UFO07403.5prime Sequence
1102 bp (1006 high quality bases) assembled on 2011-07-01
> UFO07403.5prime
CAGTCGACATGAAGTTGCTACCTCTGGCTTTATTAGCCTTTTTATTAAGA
CCGAAACCCAATGACGCGGCGCACATTTTGGGCTTGTTTCAACATCCCGG
AAAGAGCCACTTTGACTTCTTCCGTCCCATGTTCTTGGCCTTGGCGGAGA
GGGGTCACAACATTAGCATGTATAGCTATTTTCCACTGGAGAAACCAGTG
GCCAACTACACGGATTACGTCTTTCAAGGAATGCCCTTGCTCACCGATAT
TGTGGACTTAAGTAACTTTGAATCCGAATGGAAGCCCCTGGGACTGCCGT
TCAAGGTGCCCACCTACTTTATGCTTCACGATTGGGGTCTGCGATCCTGT
AAGGTGGCCCTGAACTCACCCCTCATCACCCAACTGCTCAAGTCCCCCAT
TCGATATGACGTCATACTCCTGGAACACTTCTCCAACGATTGCATGGCAG
CGGTGGCCCACCTATTGAATGCACCTGTAATCGCATTGAGTAGCTGTGCG
ATAATGCCGTGGCACTACAAACGCATGGGAAGTCCGTTCATTAACCCCAT
TATGCCCATGAATTTCCTGCCCTACACTGATGAGATGAGTCTGATCGATC
GACTGAATAATTTCTTTCATTTCCACACCGTTAATACTCTGTACAACATG
ATTACCCAACCAGCCACCGATGCCCTGATCGCTGAGAGATTTGGACCCGG
TCTGCCGCCCATCAATGAGATCGTGAAGAATACGAGTCTGATGCTGATCA
ATCAGCATTACGCCCTAACCGGACCACGCCCCTATGCTCCGAATGTGATT
GAAGTGGGTGGGCTGCAAGTGGGGCCGATAAAACCACTTCCACAACACCT
GCTAGATCTTCTGGATCGATCTCCCAATGAGTAATCTATATCAGCTGGGG
CTCCATGGTAAACAGCATACACTTCCTCGGGCAGCGAGTGCGCTTTCAAA
GCATTTCCCAACTAAGGATACACTTTGTAATGCGCTGGATAGTTAGATCT
CTGGAGATACAGCCTCGAACTTACACTTTCGACTGCTGCAAAGAGATCTT
TTTGTGGTACAAGATCAGCCTTTATCTCCATGGCGATGTGGACCACGGAG
GC
UFO07403.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17324-RB | 1680 | CG17324-RB | 78..1182 | 9..1085 | 4790 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18820570..18820952 | 264..646 | 1915 | 100 | Plus |
| 2L | 23513712 | 2L | 18820256..18820510 | 9..263 | 1275 | 100 | Plus |
| 2L | 23513712 | 2L | 18821012..18821214 | 643..845 | 1000 | 99.5 | Plus |
| 2L | 23513712 | 2L | 18821723..18821806 | 846..927 | 320 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:59:31 has no hits.
UFO07403.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:10 Download gff for
UFO07403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17324-RB | 73..1150 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:40 Download gff for
UFO07403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17324-RB | 73..1150 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:04 Download gff for
UFO07403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17324-RB | 73..1150 | 1..1061 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:04 Download gff for
UFO07403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18820251..18820510 | 1..263 | 98 | -> | Plus |
| 2L | 18820570..18820952 | 264..646 | 100 | -> | Plus |
| 2L | 18821016..18821214 | 647..845 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:40 Download gff for
UFO07403.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18821016..18821214 | 647..845 | 100 | -> | Plus |
| arm_2L | 18820251..18820510 | 1..263 | 98 | -> | Plus |
| arm_2L | 18820570..18820952 | 264..646 | 100 | -> | Plus |
