UFO07404.5prime Sequence
977 bp (859 high quality bases) assembled on 2011-07-01
> UFO07404.5prime
CAGTCGACATGTGGATCGTACTGTGCGCTTTTCTTGCCCTTCCACTGTTC
TTGGTGACCTATTTCGAGCTTGGACTACTGCGGCGAAAGCGAATGCTGAA
CAAATTCCAAGGCCCAAGTATGCTGCCTTTGGTGGGCAATGCTCATCAGA
TGGGAAACACTCCCACAGAGATTTTGAACCGGTTTTTTGGCTGGTGGCAT
GAGTACGGCAAGGATAACTTTCGTTATTGGATAGGTTACTACTCCAATAT
TATGGTCACTAATCCCAAATACATGGAGTTTATACTTAGCAGTCAAACTC
TGATATCCAAGTCCGATGTATATGATCTTACTCACCCATGGCTGGGATTG
GGCCTCCTCACCAGTACTGGCAGCAAATGGCACAAACACCGGAAGATGAT
AACCCCAGCCTTCCACTTCAACATCCTGCAGGACTTTCACGAGGTCATGA
ACGAGAACTCCACCAAGTTCATAGATCAGCTGAAGAAGGTGGCAGACGGA
GGCAACATCTTCGATTTCCAGGAAGAGGCACATTATTTGACTCTGGACGT
CATTTGCGATACAGCTATGGGTGTGTCCATCAATGCCATGGAAAACCGAA
GTTCCTCCGTTGTGCAAGCCTTTAAAGATATTACCTACACCATTAAGATG
AGAGCTTTCAGTCCGTGGAAGCGCAACAAATACCTCTTTCACTTTGCTCC
TGATATCCAGAATATAGTAAAACACTGAAAACCCTGCAGACTTTACCAAT
GAGATAATAGCGAAGAGATCGAATCCGAAATCAGGCTTGAAGTCGCTTAA
GTGCATCTCGAGAATGCTTTGACCGTGCTCAAGGAGATCTCGCTCAACTA
CAGATCACTTGTAGAGCTCATCGATGCTATCACAGCGATTAGAGTGGCCG
TGACTCGACAATGTTAGGCTTCAGTTGTCAACATGTGAGCAGTATCCAGT
GTATGAGAGTACTCAACAGACGAGCAG
UFO07404.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4e1-RA | 1772 | CG2062-RA | 53..845 | 9..795 | 3815 | 99.2 | Plus |
| Cyp4e2-RB | 1880 | CG2060-RB | 272..916 | 123..765 | 1075 | 78.5 | Plus |
| Cyp4e2-RA | 1783 | CG2060-RA | 175..819 | 123..765 | 1075 | 78.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8448101..8448452 | 277..628 | 1760 | 100 | Plus |
| 2R | 25286936 | 2R | 8445532..8445883 | 277..628 | 950 | 84.7 | Plus |
| 2R | 25286936 | 2R | 8447503..8447662 | 9..168 | 800 | 100 | Plus |
| 2R | 25286936 | 2R | 8448527..8448668 | 629..768 | 610 | 98.6 | Plus |
| 2R | 25286936 | 2R | 8447930..8448042 | 166..278 | 565 | 100 | Plus |
| 2L | 23513712 | 2L | 9749185..9749442 | 593..336 | 480 | 79.1 | Minus |
Blast to na_te.dros performed 2014-11-26 23:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tirant | 8526 | Tirant TIRANT 8526bp | 3716..3814 | 662..759 | 141 | 61.6 | Plus |
UFO07404.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:10 Download gff for
UFO07404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e1-RA | 27..837 | 1..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:42 Download gff for
UFO07404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e1-RA | 45..855 | 1..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:07 Download gff for
UFO07404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4e1-RA | 45..855 | 1..804 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:07 Download gff for
UFO07404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8447495..8447662 | 1..168 | 98 | -> | Plus |
| 2R | 8447933..8448042 | 169..278 | 100 | -> | Plus |
| 2R | 8448103..8448452 | 279..628 | 100 | -> | Plus |
| 2R | 8448527..8448715 | 629..808 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:42 Download gff for
UFO07404.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4335000..4335167 | 1..168 | 98 | -> | Plus |
| arm_2R | 4335438..4335547 | 169..278 | 100 | -> | Plus |
| arm_2R | 4335608..4335957 | 279..628 | 100 | -> | Plus |
| arm_2R | 4336032..4336220 | 629..808 | 92 | -> | Plus |
