UFO07407.5prime Sequence
1143 bp (1026 high quality bases) assembled on 2011-07-01
> UFO07407.5prime
CAGTCGACATGAGCTTCACCAAGTGGTTCAAGAAGAAGGGCGGAGATGGG
GGATCGATCTCAGAGATCGGTGCACCCACAAACTTCCAACGGCACTTCCA
TGTCTCGCGCAACCAGGAAACCGGCGACCTGGAGGGGCTTCCAGCTCCAT
GGGTGCGCCTAATGAACTCACAGATCACTCGCGATGAGCAGGACAAGAAT
CCAGATGCTGCCTACCATGCCGTTAAGTACTACAACTATTCGATTAAGAA
GAAAGAGAACGAGGTCTTCAAGCCCTTCATCACCGAAGATGTGATCCACG
AGGAGTCCAAGGAGATAGAAAACTATGTCAACTACAAAAACAAGCACAAG
TCTCAGGATCCCGAAAAGTCCGACGACGATGGCAGTTCGACGGCCACGGA
GACGGAAAGTAGCAGCGGTTGTGGCTCCTCGGCAGGTAATAGTAACAGCA
GCAGCATCAACGACAGCAGCCAGCAGTCGACGGTGCCGCTGGACGCCCTA
GAGGAGGTGTTCAAGGAGCTCAAGACCAATCTGGAGCACCGCGAAACGCT
GAAGGCCGCACCGCAAGAGCCTCCACCAGTACCGCCCAAGAAATCGCCCC
ACACCATACCGCCCAAACCGCAAATCAAGCCCAAACCTCGTGTCACACAG
AAGTTCTCACGCACTTCGGATATACGTCGAGATGAGGACTCCGACAACCA
GCACAAGATCAACACAGACACAATCATCATCAAGCCAGCCGTAGGGGCCA
GGATGCTGGAGCGGATGATAATCCCGACGAGACGATACTGCGCCGCTCCA
AGGAGAAGAGGGCCCAGAAAACCGATGCCGAAATCTACGTTGAGCTGCGG
GCAATTTGCAATTCAGATGACCCAAGGAACGCTACAAGACCACCCAGGAG
TGGGCAAGGAGCTTCTGGCATAGTTTTCATAGCCGCCGATTTGCAGAACG
AATCGCAGGTGGCCGTCAGACCATCGATATGAAGAACCAGTCCTCGAAGA
TCTCATACTCACAGAAAATCCGAGTGCTCAGACTCAACACAAGAATCTGG
TAAACTTTCTGGATGCCTACTCTGAGCCCGAGAACAACTGTGGTTGGTCA
TGGAGTACATGAATGGCCGTCCATTGACCTGACGTCGTAACGG
UFO07407.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pak3-RC | 4983 | CG14895-RC | 912..2053 | 9..1138 | 5250 | 98.1 | Plus |
| Pak3-RD | 4983 | CG14895-RD | 912..2053 | 9..1138 | 5250 | 98.1 | Plus |
| Pak3-RA | 3244 | CG14895-RA | 912..2053 | 9..1138 | 5250 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16451778..16452910 | 1128..9 | 4910 | 97.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:59:49 has no hits.
UFO07407.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:12 Download gff for
UFO07407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pak3-RC | 919..2065 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:46 Download gff for
UFO07407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pak3-RA | 912..2058 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:13 Download gff for
UFO07407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pak3-RA | 912..2058 | 9..1143 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:13 Download gff for
UFO07407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16451764..16452910 | 9..1143 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:46 Download gff for
UFO07407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12277486..12278632 | 9..1143 | 97 | | Minus |
