UFO07410.5prime Sequence
900 bp (814 high quality bases) assembled on 2011-07-01
> UFO07410.5prime
CAGTCGACATGATTTTGGAGGAACTGGCTCGTACGCATCCAGATGGAAGG
CGTGACTATATATATTATCTTGCGTTTGGTAATGCTCGTATCAAGGAGTA
TACGTCTGGCTTAAAATACTGCCGAGCTTTTCTTGACATCGAGTCAAATG
ATCAAGTTCGCTCCCTAGAGGAATATATTAAAAAAGAAATCGATAAGGAA
GTGGCAAAGGGTATGGTGGTTGCAGGCGGAGCAGCTTTAGTACTTGGCGG
AATATTAGGACTTGGCATTGCTATGGCTAGAAATAAACAAAAACGGGAGA
AAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGG
AAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCTTCAGCAC
CTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGA
AGTTGTCCCTATTTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCA
GGGATTGGCTGGAGACGAAAAACATATTCTCAATAAACCCTTAAGGGAAA
TAGGCCAGGTTTTCCCCCTTACACGCCCCCTCTTGCGAATATATGTGTAG
AAACTGGCGGAAATCTTCGTGGTATCCCTGAGAGCGAAGAAAAGTTCAAT
UFO07410.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fis1-RG | 557 | CG17510-RG | 108..401 | 9..302 | 1470 | 100 | Plus |
| Fis1-RC | 698 | CG17510-RC | 249..542 | 9..302 | 1470 | 100 | Plus |
| Fis1-RA | 630 | CG17510-RA | 181..474 | 9..302 | 1470 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5604243..5604405 | 171..9 | 815 | 100 | Minus |
| 2R | 25286936 | 2R | 5603900..5604014 | 283..169 | 575 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 23:59:22 has no hits.
UFO07410.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:08 Download gff for
UFO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RC | 243..536 | 9..302 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:35 Download gff for
UFO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..474 | 9..302 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:01 Download gff for
UFO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fis1-RA | 181..474 | 9..302 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:01 Download gff for
UFO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5603900..5604012 | 171..283 | 100 | <- | Minus |
| 2R | 5604244..5604405 | 9..170 | 100 | | Minus |
| 2R | 5603743..5603761 | 284..302 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:35 Download gff for
UFO07410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1491248..1491266 | 284..302 | 100 | <- | Minus |
| arm_2R | 1491405..1491517 | 171..283 | 100 | <- | Minus |
| arm_2R | 1491749..1491910 | 9..170 | 100 | | Minus |
