UFO07421.5prime Sequence
1132 bp (1024 high quality bases) assembled on 2011-07-01
> UFO07421.5prime
CAGTCGACATGTCTGCCTTTAAAATTGCTTATGCCTGTCGTTATTGTGGC
AATATCGTCAGCTACAAGTCAGCCAAAGTGAATGAGACGCCCTACGACTT
GCTCCTGAGCCGTACCTTCAACCTAATCCAAGAGGACAGGATCAGGGAGA
CAAATGGGGAGCGATTCCAGAATCTGCACTGCTCCAAGTGCCGCATGGAA
CTGGGTCTGCTGTGCTTGCAGAGCGAAAGGAATGTCCAACTGAAGGGACT
TTCGCTGTTGGAGAAGGTTCATCTGGTGGTGTACGACTCGTACGAGGTGC
CATTCGAGATGGCCTCACTTCGTGACGCAAGCTTTCTAGACCATTCGTTT
GGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCA
TAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCT
CACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGA
TGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCT
CGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAAT
TCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAAC
CTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGC
CCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAA
TCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATT
CTCAATAAACCCTTTAGGGAATAGGCCAGGTTTTCACCGTAACACGCCAC
ATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCAC
TCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAA
GGGTGAACACTATCCCATTATCAACCAGCTTCACCGTCTTTCATTGCATA
CGAATCGATGACATCACAGCGCAGATGGATAGCGATAACTGGCTATTTCT
ACGCTAAAGCGAATCACTGACGCGTAGGCTGACCTGACTGATGCCCATTC
TACAGCTGATATCACGGATCGATTTCATAGTC
UFO07421.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:00:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13171-RA | 386 | CG13171-RA | 21..338 | 9..326 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12214030..12214347 | 9..326 | 1590 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 894..961 | 123 | 68.1 | Plus |
UFO07421.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:18 Download gff for
UFO07421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 23..344 | 4..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:07 Download gff for
UFO07421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 23..344 | 4..326 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:31 Download gff for
UFO07421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13171-RA | 17..338 | 4..326 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:31 Download gff for
UFO07421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12214026..12214347 | 4..326 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:07 Download gff for
UFO07421.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8101531..8101852 | 4..326 | 99 | == | Plus |
