UFO07422.5prime Sequence
1121 bp (1024 high quality bases) assembled on 2011-07-01
> UFO07422.5prime
CAGTCGACATGAAATTGAAAATCAATCTGACGTTCCTCCGTGCGACACTC
GTCGGTCTCCTGTCCATCATCCTCCTGACACAGACCGCGCATATCGAGGC
CTTTGGAAGCGGAGGCAGCTCTTCTGGCAATGGGGCAGTGGTGTCGTGCA
AAGAGCTGAACAATTTCAACTGCTATGTGGGCCGCAACGAGGGTAACTTT
TGCAGCAGGAAGGATCAGACCAAGGTCGTTACACGCTGGTACTTCGACAA
GGGCGTCTGCAAGCCCTTCAACTATAAAGGATGCAACGGCAATCGCAATC
GCTTCTGCTCGCAGGAAAGCTGCGATGCACGCTGCGGCGATGCAAGCTTT
CTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAA
TCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGAC
TAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTT
CTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAG
GAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCG
CAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACA
AACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTT
GCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTT
CACCGTAACACGCCACATCTTGCGATATATGTGTAGAAACTGCCGGAAAT
CGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGG
AAAACGGTGTAAACAGGGTTGAACACTTATCCCATATTCAACAGCTCACG
TCTTTCATTGCCCATACGAAATTCCGGATGAGCATTCATCAAGCGGGCAG
AATGGTGATAATGCGAACAACTTGGTTCTATTTTCTTAACGGTCTTTAAA
GGGCGCAATATCACGCGTGAA
UFO07422.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14298-RB | 875 | CG14298-RB | 256..590 | 7..341 | 1675 | 100 | Plus |
| CG14298-RA | 695 | CG14298-RA | 76..410 | 7..341 | 1675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 23:59:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18876738..18876919 | 160..341 | 910 | 100 | Plus |
| 3R | 32079331 | 3R | 18875783..18875935 | 7..159 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 23:59:59 has no hits.
UFO07422.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:14 Download gff for
UFO07422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14298-RA | 76..410 | 7..341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:50 Download gff for
UFO07422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14298-RA | 76..410 | 7..341 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:16 Download gff for
UFO07422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14298-RA | 76..410 | 7..341 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:16 Download gff for
UFO07422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18876738..18876919 | 160..341 | 100 | == | Plus |
| 3R | 18875783..18875935 | 7..159 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:50 Download gff for
UFO07422.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14701505..14701657 | 7..159 | 100 | -> | Plus |
| arm_3R | 14702460..14702641 | 160..341 | 100 | == | Plus |
