UFO07423.5prime Sequence
1150 bp (1051 high quality bases) assembled on 2011-07-01
> UFO07423.5prime
CAGTCGACATGCAGTTGTTGGCTGCGATTCTAGTGCTAATCCTGGCCAGC
TTGGCCCACGGTAGACCCACTTTCGATAAGATTGCGGAGCTTCTGTTCGG
CGACCCAAATCATTATCCGCCAGCAAGGCCAGTTGATCCACAGCTACATC
CTGGACCAGGTCCACTCATCCAGGAGGGCTACGAGCAGGGCTACGACTAT
CACTATGGTGGAGGCTACGGCTACGGTGGTAGCCACCAGCAGACGCATCC
AGGTGGCTATGCCTATTACCCACCACGACCGGTTCCGGCAGCAAATGACT
ACTATCCACCACCTTGGTCAGTGCGTCCTTCGCCTGGATACTACTCTCAG
CCGTCTCATCCTGCCAGTGTCCATTATCCGCACAAGAATCAGGATCTTTA
CGGAGGTGGAGGTGGTTACAAGCAGCGGGGTTACGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCA
TGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
ATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCA
CGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAA
AACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTA
ACACGCCACATCTTGCGAATATATGTGTAGAACTGCCGGAATCGTCGTGT
ATTCACTCCAGAGCGATGAAAACGTTTCAGTTGCCTCATGGAAACGGTGT
AACAGGGTGACCTATCCATATCCACCAGCTCACGTCTTTCATGCCATACG
AATTCGGATGACATTCATCAGGGCGGGCAGAATGGTGAATAAGGCTCGGA
UFO07423.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:00:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13641-RA | 542 | CG13641-RA | 27..452 | 9..434 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:00:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24864281..24864706 | 434..9 | 2130 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:00:04 has no hits.
UFO07423.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:14 Download gff for
UFO07423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13641-RA | 75..508 | 9..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:04:52 Download gff for
UFO07423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13641-RA | 27..460 | 9..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:18 Download gff for
UFO07423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13641-RA | 27..460 | 9..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:18 Download gff for
UFO07423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24864281..24864706 | 9..434 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:04:52 Download gff for
UFO07423.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20690003..20690428 | 9..434 | 100 | | Minus |
