UFO07430.5prime Sequence
1128 bp (1011 high quality bases) assembled on 2011-07-01
> UFO07430.5prime
CAGTCGACATGGGCGACTATCACGAGTTCACGGACCAGTACAAGGTGCCG
GTGATAGCGAAGCTACTCCACGCCCTGCCCCACTATAACATCACGTTCCA
CAAGATCAACAGCACGTTCCGGCCCAACGATGAGATCTACCTGGAGAGCC
TGGGCATTCTGGGCTCGGTTCCGGCTGCCCTGCTGATCGTCTCGCTGCTG
GGACTGCTCTTCTATCTCATGACCCGCTGCTGTGACCGGAAGCCCCGGCC
AGCCCACTCGATCACTAGCCTGAAGGTGGCCCTGTCCATTGTGACGGTGA
TGTGCTGCGCGGCGATTGGATTGGGATTATATGGGAACGATGATCTGCAC
AACGGACTGCTGGAGGTGCTGACGGCGGGCAGGAAGGTGGACAATCTAGT
CACGACCATCCGCAATCAGACGCACATCTTGGAGAACACGCTGACGAATC
GCATACGGCCGCAGCTGGTGGAACTGGCGGACATCTTCGATCAGCCGGTG
TCGAACCAAACTGCCCTCTCCAAGCTCTTTGTGTCGCTCAATATTGTCCA
GGGAAATGTTACCCTAGCCACCAATGCGGCCAGCGATATCAGACGACCCC
TGATGGGCATTTCCATGACGCACTTCCTCACGCGCGGCGACCAATGGGAA
CTCATCCGCTGGCCGGGCACGGTGGCCACCTTGGCCCTGCTACTTGTCTT
GTGTGCCGTGCTGCTGGTGGGCGTGGCCCGGCACTCGCGATGCGCCCTAA
TCCTGTTCAGCGTGTGCGGCTTGCTAGCCGTCACCGGTTCGTGGCTCATG
TCCGGTCTGTATCTCTCCTCCTCGGTGGCTGTCGGCGATCTGTGCATCTC
ACCAGCGGATTTTCTGGTGTCCACGGCACCCAGGGATCTGCCCACGAATG
TGCTGCTGCATTACACCCATGCGACAGCCACACGATCGTTACCCACGCTG
AGGATCGCAGATCCTAACATGCTCGCATGCATGCACGTTATGAGATTCGC
TGTGCTCTCATCTCGGGCTGCAGCAGCTGTGCTGAATGCATTGAATACAT
GAAATGCTGACACTGACGGCTCGGATGCAAGCATGCATCCAATTTTGCCG
CCCAGACTGCGGGATTTGAGATAGCTAG
UFO07430.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:00:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tty-RF | 6642 | CG1693-RF | 395..1325 | 9..935 | 4565 | 99.6 | Plus |
| tty-RE | 3853 | CG1693-RE | 335..1265 | 9..935 | 4565 | 99.6 | Plus |
| tty-RD | 7199 | CG1693-RD | 995..1925 | 9..935 | 4565 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21335995..21336482 | 632..145 | 2440 | 100 | Minus |
| X | 23542271 | X | 21335644..21335931 | 919..632 | 1440 | 100 | Minus |
| X | 23542271 | X | 21336775..21336912 | 146..9 | 690 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:00:55 has no hits.
UFO07430.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:21 Download gff for
UFO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RA | 329..1268 | 1..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:16 Download gff for
UFO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RD | 986..1925 | 1..935 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:38 Download gff for
UFO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tty-RD | 986..1925 | 1..935 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:38 Download gff for
UFO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21335644..21335930 | 633..919 | 100 | <- | Minus |
| X | 21335995..21336480 | 147..632 | 100 | <- | Minus |
| X | 21336775..21336916 | 1..146 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:16 Download gff for
UFO07430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21206671..21206957 | 633..919 | 100 | <- | Minus |
| arm_X | 21207022..21207507 | 147..632 | 100 | <- | Minus |
| arm_X | 21207802..21207943 | 1..146 | 97 | | Minus |
