UFO07443.5prime Sequence
1127 bp (1022 high quality bases) assembled on 2011-07-01
> UFO07443.5prime
CAGTCGACATGCAGGCCCATCATGCGATGCCCGATTTCCGATGCCGGAAT
AATTGCCAGCACAAGGAGTGCCAGAGGCATGCTCCTTTGGGCATAATCGA
TCAGCACACCCAGTGCAAGTGCTTGGGCGAGGTAAATGCCTCATCGATTT
TCCTAGAAAATGTCCTGGACCTGGCCAACACTTTGGCCCAGGTGATGATC
ATCTGTGGACTGCACGAGTGCAAAGCGAAATCAACCGTGGACATTATCAC
ATATGCCTTCTTGCATTACGATCAGGTGTGCTATTGCATTGATACCACGC
CCAAGAAGCGACTGAGAAAGGAGGATTTGTTCCACGAGCTGGGCAAGAAG
TCGCTGATGAACAAGGTGGAGGCCCACTTGGCCTATGCCATCATCAAGAG
GGGATTCAAGGCCTTCTACTACGAGCCGAAAGTGGACTTGACCTACGATG
AGCAAGGCAGACCCTCGTACAACGATGAATGCGTCTGGGTCCACGCAGCC
AGGAAGTCAGCCGAGTCCTATGCCCGCTTCGATGGCCTCTCCTGCGCCGA
ACAGTTGGCATACGAGGCCAAGATCAAAATAGCCTTCAAGAAGTTCTACG
ATCGCATGCAGACGCGCAAGAGGCAGCCGGAGGGCGACGATTGCAACTGC
TGCTTCTGTGCCAAGAAGCGGGGACATCTGGTCTATGCCAAGGAACCGAC
TCCCTGCACTTCCAACAAAAAGAAGCCCAAGCACGTGTGTCCATATTGCT
GCAAGAAGAAGCAGAAGCAGCAGTACACACACCCTGCTCGCCAGCCGGCC
AAGTGCCCCAAGTGCCACAAGTCGCGCAAGTTCTGCTGCTGCACCAAAAT
GGACTTCAACTTGCAGTGGGTCAAGAGCATATGGGAGCGGCCGGACTTCA
ATCAGTACTACAGAACGAGATCGCCGAAATCGAGACCGCCTGGTCAAGGG
AACCTGCTGGCTGCCGCCGGAGCCTGAGAGAAGCTGCTCGATGAGGCGAG
GCAGAGAGAAGAGCCACCAGGAAATGCGCCGGAGGCTCTCCTCGCCCTCG
CCGCAACGTGCCACTATACCGGATGAGAACGTCTCCATGCACCAAACGCG
TGATACGGAGGTGAGGCTCAACCAAGC
UFO07443.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:01:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3517-RA | 1421 | CG3517-RA | 143..1227 | 9..1076 | 4990 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:01:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19424067..19425057 | 996..9 | 4805 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:01:33 has no hits.
UFO07443.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:26 Download gff for
UFO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3517-RA | 134..1227 | 1..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:31 Download gff for
UFO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3517-RA | 134..1227 | 1..1076 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:54 Download gff for
UFO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3517-RA | 134..1227 | 1..1076 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:54 Download gff for
UFO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19423973..19425061 | 1..1076 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:31 Download gff for
UFO07443.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15249695..15250783 | 1..1076 | 97 | | Minus |
