UFO07445.5prime Sequence
1156 bp (1040 high quality bases) assembled on 2011-07-01
> UFO07445.5prime
CAGTCGACATGGGTGGCGGAGATCTAAATCTGAAGAAATCATGGCATCCG
CACACGATGAAAAACCAGGAGCGCGTTTGGAAGGCGGAGGAGCAAGCGAA
GATGGAGGAGCGCAAGCTGCAGGATCTGCGCAAGGAGATCAACGAGGAGC
GGGACAGAGAGGAACTAAGGCGATTGGGCGAAAGTTCCGGAGTGCTGAGC
AATAATGGCGGAGCCGCCGGCGAGGCCAAGCTGGAGTGGATGTACAAAAA
CAGCACAGAGCTGATCAACCGCGAGGAGTACCTCCTGGGCCGTAAGATCG
ACAAGTCCTTTGAGACGCTGCAAGCGGAGGAAAGCCGCCAGGAGCAGAAC
ACAGTGGGTCTCAAGCAAACGATCAACCATGTGGAGCACGACTGTGTGCC
CTTCTCCATCCGGACCTACCGCAATGTGCAGTCCAACGAACAGGTGGACA
TACAGCGCAAGACCCTCGAGGATCCCCTGATGCTCATCAAGCAGCGCGAA
ATGGAATCCCGTCGAAAGCTGCTTGAGAACCCCGTCAAGCTGAAGGAAAT
CCATCGCATTCTCAAGACTGAACAGGAACAAAAGGCCGCAGAGGGAAAGA
AGAAGAACAAGAAGAACAAAAAGTCTAAGAAATCCAAAAAGAAGAAGAAG
AACCGACGATCCAGCAATGAGGAAAGTAGTGACAGCGAGAGCAATGATAG
CGACGATGACTTGGACAGAAAATTAGCCCGCCAAGTGAGCAAACTCAAGG
GAGACCAAGGTGACCTTAAACTGGACAAGCTGCTGGACGCCAAGTACCGC
ACCATTTCAAATCAATTAGACATGGCCACCAAGAAGAAAAAGAGCAAGAA
ATCCAAGAAGAAGAAAAGCAGCGATAGCAGTGACGAAAGTAGTGACGAAG
AGGAAGAGCCAAGGAGAAAGCACAAAAGGAGCCCCAGCTCAGAGGACAGA
AATCAGCGAGAAAGACGCAGGAGTAGAGCCCCCGGGATAGAAAAAGCGAC
AGGAGTAGAGTCCGGACAAAGCAAAGGCAAAGGAGTCAGAAGAGGAGATG
GAAGCCGCAGAGCAGGAGCAGAAGTCCCTTACGGAGAGACGAGAGACCAG
AGCCCAAAGGAACGAAAGCCAGACGTCAAGCAGACCCTTCAGCAGCCGAA
ACCAGA
UFO07445.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:01:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cwc25-RA | 1730 | CG2843-RA | 102..1235 | 9..1129 | 5145 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:01:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2745557..2746303 | 250..995 | 3670 | 99.7 | Plus |
| 2L | 23513712 | 2L | 2745272..2745494 | 27..249 | 1115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:01:38 has no hits.
UFO07445.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:27 Download gff for
UFO07445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cwc25-RA | 98..1246 | 9..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:34 Download gff for
UFO07445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cwc25-RA | 102..1250 | 9..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:55 Download gff for
UFO07445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cwc25-RA | 102..1250 | 9..1141 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:55 Download gff for
UFO07445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2745199..2745216 | 9..26 | 100 | -> | Plus |
| 2L | 2745272..2745494 | 27..249 | 100 | -> | Plus |
| 2L | 2745557..2746464 | 250..1141 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:34 Download gff for
UFO07445.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2745199..2745216 | 9..26 | 100 | -> | Plus |
| arm_2L | 2745272..2745494 | 27..249 | 100 | -> | Plus |
| arm_2L | 2745557..2746464 | 250..1141 | 96 | | Plus |
