UFO07453.5prime Sequence
1006 bp (896 high quality bases) assembled on 2011-07-01
> UFO07453.5prime
CAGTCGACATGGCGCGTGCAGCTCTGTGCATGGCCGTCGCATGCATTTTC
TTGCAATGCGTCTACTCTGCTAAGTTCGATGAGCAGAACCGTCGTCTAAT
TCTCGACATTGACGACCAAAAGACAACGAACCGTCAGTACTATTCGTCAA
ACATTGACACAAATGCCTATAGGTATGGCTACGATGTCGGCAAGACCGGC
AACTTCCATCACGAGACCCGCGGTCCCGATGGAGTTACCTACGGCTGCTA
TGGCCTGATCGATCCCTACCACCTCCTCCGGGCAACACACTACGTGGCCG
ATGCCCACGGTTACCGCACCGTGGAGCCGGAGAAGCCAGTGGAGACATTC
CCGCCCCATCTGTACAGCGAGACCAACGGTGGTCCATCCGAGCCTGGCAT
TGTGCTGCAGTGGGAGGAACTGTACTTCCCCATCGGATGTGGAAAGTTTG
CGAATGGTGCCCAGCACGGCGTCCCATTCTTCCTAGATGATTTTAAGAAC
AAAGGCGGCAGCAACGATGCGATACCATCGTTCTCAGCCAACACAATTGT
GATCAAGGGCTCCGACCAGAAGAGTCTGCCCATCCACAAGCCCACTGGTC
CACTGGTGCCGCAGGGCACGGGGATCTTTGGCACGGACAAAGGGTCATTC
GGATCTCAGCCATCCCGGCGATCAGGCGCCGTCCTTCCATTCGGTGAACA
CCCTGCTACCGGGCAGCAACAATGATGGCCAGTACGTGCCGGATAGTATC
CCTATGTCCATGTGATTGGACCCAATGCGGAAATGGAGGCATGGAGCAGC
GCTCTGCGCGTTTCGGTGAAACGGAGATTTGAGCGTTGCGTTCGGACCCA
TGCCCGGTGGCCCGATGACAAGGACCAAGGTCCTCGGGACACGGGACCAC
CTGCGGCTGGTCAGTCGGCCGGGAGGAGACTCAGAAACGGTCTACAGAGG
CAATCGCCTGGCTGGGACTGTCGGATACGTTCGGTATCATCACACGGAAC
GTGCGT
UFO07453.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10625-RH | 4234 | CG10625-RH | 353..1304 | 9..928 | 3935 | 96.4 | Plus |
| CG10625-RE | 3580 | CG10625-RE | 132..1083 | 9..928 | 3935 | 96.4 | Plus |
| CG10625-RB | 3441 | CG10625-RB | 124..1075 | 9..928 | 3935 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5543619..5543947 | 491..163 | 1645 | 100 | Minus |
| 3L | 28110227 | 3L | 5543233..5543465 | 725..492 | 1105 | 99.1 | Minus |
| 3L | 28110227 | 3L | 5544972..5545102 | 162..32 | 655 | 100 | Minus |
| 3L | 28110227 | 3L | 5543103..5543174 | 791..722 | 260 | 97.2 | Minus |
Blast to na_te.dros performed 2014-11-27 00:02:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Galileo | 2304 | Dbuz\Galileo GALILEO 2304bp | 635..674 | 187..148 | 110 | 75 | Minus |
UFO07453.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:31 Download gff for
UFO07453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10625-RE | 345..1185 | 9..838 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:46 Download gff for
UFO07453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10625-RB | 124..964 | 9..838 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:06 Download gff for
UFO07453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10625-RB | 124..964 | 9..838 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:06 Download gff for
UFO07453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5543619..5543947 | 163..491 | 100 | <- | Minus |
| 3L | 5544972..5545101 | 33..162 | 100 | <- | Minus |
| 3L | 5550784..5550807 | 9..32 | 100 | | Minus |
| 3L | 5543237..5543465 | 492..721 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:46 Download gff for
UFO07453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5536337..5536565 | 492..721 | 99 | <- | Minus |
| arm_3L | 5536719..5537047 | 163..491 | 100 | <- | Minus |
| arm_3L | 5538072..5538201 | 33..162 | 100 | <- | Minus |
| arm_3L | 5543884..5543907 | 9..32 | 100 | | Minus |
