UFO07457.5prime Sequence
975 bp (822 high quality bases) assembled on 2011-07-01
> UFO07457.5prime
CAGTCGACATGATGATGAACGCCTTCATTGAGCCGGCTCAGCACCACCTG
GCCAGCTACGGGCTGCGAATGTCGCCCAACACCACCGCCAGTAACAGCAA
CGCGCAGCAGCAACAGCAGCAGCAACTGGAGATGACCCAACAGCAGCAGC
AACAACAGCAACAACAGCAGCAGCAACAGCAACAGGATCAGGAATCCGCG
GCGGCCACTGCTGCAGCCTATCAGAACTCCGGATATGGGCACTTTAACAG
CTATGCCTCCCGGGACTTTTTGCTGGGCAGGAGGGAGGCCGAGTACGGTG
TGGCAGGATCCGCCGGACAGGCCTCCGCCGCAGCGGATTCCATGCTCTTC
TCCGGCTTTCCCGCTCAGGCCGCGGAGCTGGGCTCCGGGTTCGGACAACA
CCCCTTCCACAGCCACCATCTCCACCATCAGATGCGAATGGGCATGGCGG
ATGCCTACGCCGCCGGCCACCCGTACAACCACCACGGCAACTTCCCGACG
GCGGCAGTGCACCACCCGGTCGTGCACCACCCGTCCCACCACGCCATGTC
CGCGATGCACCCGGCCGGAGCAGGGGCCTTCCTGCGCTACATGCGCCATC
AGCCGGCCTCGTCCGCCTCCAGCGTTAAGCAGGAGATGCAGTGCCTCTGG
ATAGACCCCGACCAGCCGGGCCTGGTGCCCCCGGGCGGCAGGAAGACCTG
CAACAAGTATTCCACTCGATGCACGAGATCGTCACCCACTGACGTGAGCA
CGTGGGCGGACCCGAGTGCACCACCCACGCCTGCTTCTGGGTGGGCTGCT
CTCGCACGACGCCCTTTCAAGGCAGTACAGCTGTCAACACATCCGCGTCA
CAACGGCGAGAAACTTTCGCTGCGCACCCGGGTGCAGCAAGTCTCGCCCG
AACGAGAAGCTCAGATCCAGCGACGCTACAGCAAAGCCTCAGTGCAGGCC
GAAGCTTGATGCGTTCCCAATCTCG
UFO07457.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| opa-RA | 2939 | CG1133-RA | 293..1225 | 8..919 | 4085 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4853105..4853926 | 8..823 | 3820 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:02:25 has no hits.
UFO07457.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:34 Download gff for
UFO07457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| opa-RA | 286..1193 | 1..891 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:55 Download gff for
UFO07457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| opa-RA | 286..1193 | 1..891 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:11 Download gff for
UFO07457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| opa-RA | 286..1193 | 1..891 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:11 Download gff for
UFO07457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4853098..4854005 | 1..891 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:55 Download gff for
UFO07457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 678820..679727 | 1..891 | 97 | | Plus |
