UFO07462.5prime Sequence
1102 bp (1011 high quality bases) assembled on 2011-07-01
> UFO07462.5prime
CAGTCGACATGTTCTGGCTGGGATTCGGATTGCTGTTGCTCGCGTTGTCC
CTATACCTGCTATATGTCTTCGAGCGGCAGAGCAGGATCGACCGGCTCAC
CCACAAATGGCCAGCCCCACCGGCCCTGCCATTCATTGGCCATCTGCACA
TTCTAGCCAAATTGGTGGGACCGCATCCACTTCGACGAGCCACCGAAATG
ATCAACGAACATCTACACGATCATCGAGCAAAACTATGGATGGGCACTAA
GCTCTATCTCGTGGACTGCAATCCCAAGGATATACAGGCTCTGTGCAGTG
CCCAGCAGCTGCTGCAGAAGACCAACGACTATAGGGTCTTCGAGAACTGG
CTCTGCGAGGGTCTCTTCACCAGTGGATTCGAGAAGTGGTCCCATCGCCG
GAAGATCGTAATGCCGGCCTTCAACTACACCATGATCAAACAGTTTGTTG
CCGTCTTTGAGAAGCAGTCGAGGATTCTTTTGACGAATGTCGCTAAATTT
GCCGAGTCCGGGGATCAAATTGACTTTCTGCAACTGATCAGCTGCTTCAC
TTTGGACACTATTTGTGAAACGGCCCTCGGAGTCTCTGTGGGTTCGCAGT
CGAGCGCCAAGTCGGAATACCTCGATGCTGTTAAATCAATCCTTGTCATC
ATCGATAAGCGACTGAAGAACATCTTCTACCGCAACTCGTTTATTTTCAA
ACGCACATCGCATTATAAGCGAGAACAGGAGCTGATAAAAACGCTTCACG
GATTCACAGAGGGCATTATACAGAAACGTATTGATGAAATCAACCAGGAT
GCAGAGAATCGCAACTACCAGAGCAGTGATGCGGAATTGGACGGAGTGAA
GCGGACCCTATGCTTTCTGGACACCTTGCTACTGTCCAAGGGTCCCGATG
GCAAGCCTTTGACAGTCAGATATTCGCGAGGAAGTGGACACCATCATATT
TGGGGGATTCGATCTCACGGCCACCACCCTCAACTTTTTCATGTATACAT
GACTCTTCATCCGAGCACCAGCAGCGATGTTCCAGAGTGTCGATCCAGCA
TGACATCTAGATCATGATCCGACGTAGACTGATCTAGCTCTCAAGCGCAT
GC
UFO07462.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp312a1-RB | 3383 | CG5137-RB | 624..1649 | 9..1030 | 5040 | 99.6 | Plus |
| Cyp312a1-RA | 1628 | CG5137-RA | 30..1055 | 9..1030 | 5040 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18131438..18132066 | 637..9 | 3145 | 100 | Minus |
| 3L | 28110227 | 3L | 18130734..18131130 | 1030..638 | 1820 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:02:39 has no hits.
UFO07462.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:36 Download gff for
UFO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp312a1-RA | 160..1199 | 1..1037 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:01 Download gff for
UFO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp312a1-RA | 22..1061 | 1..1037 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:16 Download gff for
UFO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp312a1-RA | 22..1061 | 1..1037 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:16 Download gff for
UFO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18130728..18131130 | 638..1037 | 98 | <- | Minus |
| 3L | 18131438..18132073 | 1..637 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:01 Download gff for
UFO07462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18123828..18124230 | 638..1037 | 98 | <- | Minus |
| arm_3L | 18124538..18125173 | 1..637 | 99 | | Minus |
