UFO07463.5prime Sequence
1160 bp (1021 high quality bases) assembled on 2011-07-01
> UFO07463.5prime
CAGTCGACATGCATCGATGCCGTTTTGGCATCACTAGCGACTGCGGATTT
GTGGTGTGGAAATTTCCGCAAAACAAAAATAAAAATAGACCTCGGTGTGC
CAACTTGCAAGCGATGCACAAAGGGGCGCCTCCTTGGCGAGTGGGCTGTG
CCGACGTGGCATCCGGAATGGAGTGGCAGCTGTCCGGGAATCCCGCATTG
GGAGAAGAGGAAGAGGCTGCAAACAAACAACAACAACAACAACTGATAAG
AAGTGAAAGGTGGGCCTGCAATCGCAGGACTATTCTCCTGGGATGCATCT
GCATCATTATCTTGATAGCTGTTCCCTCGAGCAATGCCACCCACATCAGC
GGACAATTCCAGACGGGCGACTTCTTTCAGTTCCTGGCGAAATTCGGCTT
CAACAAGGCAGATCTGACACGGCGCAATGCCTATGGATATATCTACGGCA
ATGTCACGTCGACGGATAAGTATGCGGTTCCTTTGACACTCGTCGTCTTG
GACAGAAGGACTTTCCTCGAGTTCTACGGCAACCGCAGTCAAAGGAGCCG
GGAAGCCGCCTGCACAGGGATGTTCTCCCGCCTCCAAAGGATCGCCTACG
ATTCCACGTGCAATCCTCGTGCCAAAAGGGACTTCCTGCGTCATGTTCCC
TGTCCCGTCAATCAGCTCTGCAGCGATGAAGATGAACCCGGAAACGTAGT
CCCGGGATCGCAGTTCACCTACGTTATCAACCTGGAGGCGGAACCAAGAT
TTTGGTACCTCTCCCTGGTGGCCTGTTATCAAAACAAAAGCACCTGCCAG
TGGCACGCGCACGAGAGCCTGCCAAGGCTAAGTAAATTGGACAGCAATCT
CCTCAACACGCTGCACTACGACATACATCTGGTCAACTTGCATCCGAACA
ACTCGGCCGCACATCCACTTACCTACCAGTACTCGTACGATCAGCAGAAT
CTACTGGAGATGTACCTGGTGTTCCTGCTCGTCTAAATTGTTCTGCTGCC
CATGCAAATTTATGGGGGGGGGCGGCAGAAGCATCCAGTGACCAAGTTGT
ACCGTGAGTCTTCTCAGCGAGTCCGTCAGCCTGGCTCTGATCCCCGCTCC
ACCTGATCATATGCGGCCCATGGGAAGTGGCGGCCAGATGCCAGCCCCTG
GAATGTCCTG
UFO07463.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:02:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9304-RB | 2785 | CG9304-RB | 10..1127 | 9..1123 | 5375 | 98.9 | Plus |
| CG9304-RA | 2595 | CG9304-RA | 10..1127 | 9..1123 | 5375 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21973131..21973870 | 9..748 | 3700 | 100 | Plus |
| 2R | 25286936 | 2R | 21974172..21974526 | 747..1099 | 1620 | 97.7 | Plus |
Blast to na_te.dros performed 2014-11-27 00:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 7148..7208 | 200..260 | 125 | 67.2 | Plus |
UFO07463.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:36 Download gff for
UFO07463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9304-RA | 1..1128 | 6..1130 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:03 Download gff for
UFO07463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9304-RA | 10..1132 | 9..1130 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:17 Download gff for
UFO07463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9304-RA | 10..1132 | 9..1130 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:17 Download gff for
UFO07463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21973131..21973870 | 9..748 | 100 | -> | Plus |
| 2R | 21974174..21974556 | 749..1129 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:03 Download gff for
UFO07463.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17860636..17861375 | 9..748 | 100 | -> | Plus |
| arm_2R | 17861679..17862061 | 749..1129 | 96 | -> | Plus |
