Clone UFO07476 Report

Search the DGRC for UFO07476

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:74
Well:76
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG8852-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07476.5prime Sequence

288 bp (161 high quality bases) assembled on 2011-07-01

> UFO07476.5prime
CAGTCGACATGGGCAGCTCGCATTTTTCGGTGGCGATGACGCAGTGCGTC
TTCCTCGTTGTCGTATCGCAGATTTTGTCACACGTGCGGGCAGCTGGCGA
TGCGATGTCTTCCGCCAACGAATCAATATCGTTGCCACCGGCTTGCGTCA
TTCGGGGCAACCCTTTAAAAGACATCTTCGTCCGAAAGGGAGTCAAAACG
ATTTTGGGCTGCCTCTGGCAATAAATTGCAGTTGAGAAACCAGTAGCATG
GGGGATGGAATTACTTTCGATTTGGGGGCGCCCAAAGG

UFO07476.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:03:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG8852-RA 2398 CG8852-RA 79..347 9..287 1090 94.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:03:18
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3525209..3525430 9..232 945 96.9 Plus
Blast to na_te.dros performed on 2014-11-27 00:03:19 has no hits.

UFO07476.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:41 Download gff for UFO07476.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 72..345 1..288 93   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:20 Download gff for UFO07476.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 74..347 1..288 93   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:29 Download gff for UFO07476.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8852-RA 74..347 1..288 93   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:29 Download gff for UFO07476.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3525204..3525477 1..288 93   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:20 Download gff for UFO07476.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3525204..3525477 1..288 93   Plus