UFO07482.5prime Sequence
1149 bp (1040 high quality bases) assembled on 2011-07-01
> UFO07482.5prime
CAGTCGACATGGACGGCAGCAGTCGTAGTTCCATGGATACCGACATGGAA
ATACAGAAGTTGCCAGTGAAACGGCACTTGCCGGTGACCAAAGGCCATGG
GTGTGTTAAAAATAAGTGCCGCCGAAATCTAGACGAGATGTCCATCCAAC
AGTTTTCCGACTCATCCTCTCAGTCGGAGGGCGATGGCGAGGAGGACTCC
AATGATGCCGACGACGAGGAGTATCAGCAGCCCGAGTGGACGGGTCGCAA
AAGGCCGCCGCTGGTCTATCTCGAGTTGGGCGATAAAATCATTATCGTTA
GGAACGAGCCACAGCCCAACGTCAAGCTGGAAGACGATGTGCAACTTAAA
ACGAAGATGCACAAATTTTTGGGTCTGATACCATCACGCCGCAAGCTCTA
CAATCCTGCGGTGGTTTACGATATGAAGCCGGAGGATATTGAGAATATCA
ATTGTGTCGTCAATTCATCCCATGCGTCCGCAGAGCCATTTACTCCATCA
GCCGAGCAACCAATTCGTCCGAAAACAATGATGACATCCACTTGGTCAAA
GCTTAATTTGTCGAATATCGATGAACCGACCCCTGAGGAGAGCCAGGCTA
AAAGCAAAAATGACTTTGAGCTCTGGTCCATTGCATTCTCCTTTGATCAG
TGCACCCCGGACTTGCATAAGGAGCCCATTGATCTTATCGATTTACCCAA
CGAAGAGCAGTTGGCCGCCAACTGCCGACGTCACAAGAGCAGTGTGCCAT
GCCTGGAGCGGCATCCAAAGTTCTACGGATTCGTTCGTTCGCTCAGCCCT
TCGATTTCGCTCAATATGTGCCATCCACTGGCGCTCACCTACAGGCAAAA
CAATTTCAAAATCTGCAAGTGGCACTGGCCAAAGTGCTGTTCAACATCTT
CAACCACGCGATCTTCCACTGTGGCCTTCAGTGCCCATTGTTTGGAAGCA
CGCAATGCACACGCGATGCACATGCCAGCTGACCGTCGATGCCCATGGTA
AGCGCAGAGCCAGATTCTACTTCTGCGGAATATAAAGACTACGCGGAACT
AATCCGCCTGCCCTGCTGCACAGAATGTTGCCACGGTGGCCGCATGTGTT
CATCGGGAGGTGGGATCACGGCGGACATTGCGCCATGTGGTGCCCTACA
UFO07482.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:03:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11322-RB | 1765 | CG11322-RB | 99..1215 | 9..1123 | 5170 | 98.1 | Plus |
| CG2694-RD | 3066 | CG2694-RD | 1705..2065 | 669..1026 | 675 | 80.2 | Plus |
| CG2694-RB | 3152 | CG2694-RB | 1791..2151 | 669..1026 | 675 | 80.2 | Plus |
| CG2694-RD | 3066 | CG2694-RD | 1279..1427 | 258..406 | 325 | 81.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6758478..6759530 | 1057..9 | 4990 | 99.1 | Minus |
| X | 23542271 | X | 2716233..2716546 | 669..980 | 585 | 80.6 | Plus |
| X | 23542271 | X | 2715807..2715955 | 258..406 | 325 | 81.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:03:09 has no hits.
UFO07482.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:40 Download gff for
UFO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11322-RB | 96..1189 | 6..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:15 Download gff for
UFO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11322-RB | 96..1189 | 6..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:26 Download gff for
UFO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11322-RB | 96..1189 | 6..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:26 Download gff for
UFO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6758487..6759533 | 6..1049 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:15 Download gff for
UFO07482.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6758487..6759533 | 6..1049 | 98 | | Minus |
