UFO07488.5prime Sequence
1133 bp (1017 high quality bases) assembled on 2011-07-01
> UFO07488.5prime
CAGTCGACATGGACAAGCGATCGTTGTGCCTGCTGCTCATCTGCATCAAT
CTGTGCCTGGTCATCTGGCTGGTCAGTGTGCAGCAGTTGCCGATGCTGGA
AGCGGAAATCATCGCCGATTTTAGCGGAAGTGGCGGCATTAGCAGCAGCA
GCACCGCACAGCCGCCAACGAGTGCCAAAAGTGGATTGCGGAGGAGCAGG
AGCCAACCAAACCAAATACACCAGCCTAGTCGCACACCTAGTAATAGTAA
TGATAGTAGCCTAGTTAGCAACACATTCGATAACCACCCCATGGGCACGC
CCCCCACTTTGGCGTCACAAACGCCCACGCCGCCACAGAGCAGCATGCAC
CTCATGGATCTGCCCAATTTCGTCTATCTAATAGACCAGCCCGCCTGTGA
TAAGGATGTCCGGGCACTGATATTGGTCCATTCGGCAGTGCGCAATATCG
AAAAGCGCCGGATAATCCGAGAAACGTGGGCGAATCGGAGCTATATAGAC
CAGACGCCGCTGAAGGTTTACTTCCTGGTGGGCGGGGTGAGCGCTAAGAG
CGAGAAGTGGCAGCAGTTCCTGGGACGCGAGAACCACCTGCACGGCGATC
TCATCCAGGGTAACTTCAAAGACGCCTATCGCAACATGACCTACAAGCAT
GTCATGGCTCTCAAGTGGTTCAACGAGAAGTGTGCGCATGCCCAGCTGCT
GGTGAAGGTGGACGACGATGTGTTTATGAACACACCGCAGCTGGTCAAGT
ACTTGGCGACACCCTCTCTGCCAGAGTACTCCATGCTCCGGGATCCCAAT
CTGATGCTCTGTCGATCCGTCCATCATTCGAGGGTCAAGCGTTCATATCG
TTCCAAATGGCGGGTGACCTACAAGGAGTACCCGAATCGTTTCTATCCGG
AATACTGTCCCGGAATGGGCCATTGTCTACGCACCGGAGTGTTGCGTCGC
CTGTACGAGCCGGCCCAGAAGTCCAATACTTCTGGGGTAGACGATGTTAC
TCATTCACGGGGATTCTGGCCGAAGAAACGGCAGTAGATCACCCCCGCTG
CAGCATTACCTTCGAGCAGAGACGTTCGCAGCTGTCGGCAGGAGCTGATC
TGAGGATCCCGTCCTCTTTCAAATCGGCATTAG
UFO07488.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:04:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11357-RD | 2611 | CG11357-RD | 416..1522 | 9..1110 | 5085 | 98 | Plus |
| CG11357-RC | 3080 | CG11357-RC | 885..1991 | 9..1110 | 5085 | 98 | Plus |
| CG11357-RB | 2326 | CG11357-RB | 131..1237 | 9..1110 | 5085 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4551098..4551940 | 9..851 | 4215 | 100 | Plus |
| 3L | 28110227 | 3L | 4552105..4552313 | 852..1061 | 565 | 92 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:04:00 has no hits.
UFO07488.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:46 Download gff for
UFO07488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11357-RC | 876..1960 | 9..1092 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:39 Download gff for
UFO07488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11357-RB | 131..1215 | 9..1092 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:48 Download gff for
UFO07488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11357-RB | 131..1215 | 9..1092 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:48 Download gff for
UFO07488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4551098..4551940 | 9..851 | 100 | -> | Plus |
| 3L | 4552105..4552346 | 852..1092 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:39 Download gff for
UFO07488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4551098..4551940 | 9..851 | 100 | -> | Plus |
| arm_3L | 4552105..4552346 | 852..1092 | 92 | | Plus |
