UFO07494.5prime Sequence
1119 bp (1019 high quality bases) assembled on 2011-07-01
> UFO07494.5prime
CAGTCGACATGCAGATGAAAAGTGGAATATTAATAGCATTATGTCTATGC
CTTTCGTTGAACGAAGGCCTGGCCCTTCTGGAGCACGAAGGCGAGACCAT
CAACAGATGCATCCAAAACTATGGCGGACTTACTGCGGAAAATGCCGAAC
GTCTAGAACGATTCAAGGAATGGTCGGATAGCTACGAGGAAATCCCCTGC
TTCACGCGCTGCTATTTGTCCGAGATGTTCGACTTTTACAATAACTTAAC
GGGCTTCAATAAGGACGGAATTGTGGGCGTCTTTGGAAGACCCGTCTACG
AAGCCTGCCGAAAGAAATTGGAACTGCCATTCGAATCAGGCGAGAGCAGC
TGCAAACATGCCTACGAGGGCTTCCACTGCATCACCAACATGGAAAGCCA
CCCGTTCACGGTTATTGACAACATGCCAAACATATCCCCGTCGGCCAAGG
ATGCAATGAAGGACTGCCTTCAGGATGTCCACCAGGACGAGTGGAAGAGC
TTCGATGCCTTCGCCTACTATCCTGTCAATGAACCGATTCCGTGCTTCAC
CCGGTGCTTCGTGGACAAGCTGCATATCTTCGAGGAGAAAACGCGTCTTT
GGAAACTGGAGGCGATGAAGCAAAACCTGGGCATTCCGGCCAAAGGAGCT
CGCATAAGGACCTGCCATCGGCACCGCGGCAGGGACCGATGTGCCACATA
TTACAAACAGTTCACCTGCTACGCGATGGCTGTTGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAA
TCCAGATGGAGTTCTGAGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATTATCAAATTACGCCCCCGCCCTGCCACTCATCGCAGTACTG
TTGTAATTTCATTAAGCATTCTGCCGACATGTGCCATCACAAAACGCATG
ATGACCTGATCGCCCACGCATCAGCCACTTGTTCGCCTTGGTATATATTT
GCATGGGAACGCGTTGGCG
UFO07494.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp83cd-RA | 899 | CG15582-RA | 54..779 | 9..734 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:03:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6109269..6109613 | 390..734 | 1725 | 100 | Plus |
| 3R | 32079331 | 3R | 6108300..6108630 | 59..389 | 1655 | 100 | Plus |
| 3R | 32079331 | 3R | 6108187..6108237 | 9..59 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:03:38 has no hits.
UFO07494.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:43 Download gff for
UFO07494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp83cd-RA | 49..784 | 1..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:28 Download gff for
UFO07494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp83cd-RA | 49..784 | 1..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:37 Download gff for
UFO07494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp83cd-RA | 49..784 | 1..740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:37 Download gff for
UFO07494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6108182..6108237 | 1..59 | 93 | -> | Plus |
| 3R | 6108301..6108630 | 60..389 | 100 | -> | Plus |
| 3R | 6109269..6109618 | 390..740 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:28 Download gff for
UFO07494.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1933904..1933959 | 1..59 | 93 | -> | Plus |
| arm_3R | 1934023..1934352 | 60..389 | 100 | -> | Plus |
| arm_3R | 1934991..1935340 | 390..740 | 99 | == | Plus |
