Clone UFO07495 Report

Search the DGRC for UFO07495

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:74
Well:95
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32281-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07495.5prime Sequence

480 bp (291 high quality bases) assembled on 2011-07-01

> UFO07495.5prime
CAGTCGACATGTTTATAGTGTCCAGATTGAAGGATTTAACGATTATAACG
AATCGTTTACGTCACTACTTTCGAAACATGGACGTCAAGGAGCTGCAGCC
TCCCAGCTCGGTGCGCGGAATGCAGGAGCTGCAAAGGGAACAGTTCCGAA
AGATCGTTCAAGTTCCGCGTTTACGGGTGCCCGAGTCTCAGGTGCAACGT
GTTATGCCGCTGGTCAAAAAAGTTCCCTGCTGAAAATGGAGCACCTGCAT
CCTGTCCGAGCTGTGGAACCAATCTCGAAAAGATCTTACTACATCCCACC
GCCTGTCAAAAACCTGGGGATTTCCCCTGCCCACAAAAGGATCCTGCAGA
GGCCAAAAAGTCAATGGCCGAGAACTTTCTCCCTTCCCCCAACCTCGAGT
TTGAGGGTATGAAAATTGGGAGGGCCCAATGAAATCCTTGAAAAAGCGGG
GTACCCCCGGGGGGGAGGAAAGGTCTAACT

UFO07495.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:03:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG32281-RA 1539 CG32281-RA 128..557 9..460 1540 92.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3169502..3169801 9..313 1235 96.7 Plus
Blast to na_te.dros performed on 2014-11-27 00:03:42 has no hits.

UFO07495.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:44 Download gff for UFO07495.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 128..452 9..343 95 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:06:30 Download gff for UFO07495.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 128..452 9..343 95 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:54:39 Download gff for UFO07495.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32281-RA 128..452 9..343 95 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:54:39 Download gff for UFO07495.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3169502..3169826 9..343 95 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:06:30 Download gff for UFO07495.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3169502..3169826 9..343 95 == Plus