UFO07512.5prime Sequence
1131 bp (1027 high quality bases) assembled on 2011-07-06
> UFO07512.5prime
CAGTCGACATGTCGCCACCACGACACATTTTGAAGCTCAGCCTCGAGGAG
CAGCGGCAGTTCATCGATTCCTTCGATTTGGTGATCAGCGACTGCGATGG
CGTCGTCTGGCTCCTGGTGGGCTGGATTCCCAACACGGGAGCCGCCGTCA
ATGCCTTGAAAGCGGCCGGCAAGCAGATCAAGTTCGTGTCGAACAACAGC
TTCCGGTCCGAGGAGGATTACATGGAGAAGTTTCGCCACATCGGCGCCAA
GAACGTCCAGGAGGACGACATCGTTCATCCGGTGAAGACCATTGTCCGGT
ACCTGAAGAAGCACAAGCCGGGGGAGCGGGTATACTCCCTCATGTCCCTC
GAAGCGAACGAAACGTTACGTAAGCACAACATCGAGTTTGAATCGCTGCA
AGTCAAGGAGCACCTGACGGCCGCGTCGCTGGTGGATCACCTGGCCATTG
AAAAGCCCGTGGGCGCTGTGCTATTCGACATCCACTTGGACCTCTCGTAC
GTGGAGCTGGCGAAGGCCATTAGGCACCTTCAGGAGAATGACGACTGCCA
GTTGATAGCCGGCGGCAGCGATGTCATCATGCCACTGGCGGAGAATCTCA
ATGTGGCCGGGTTCTTTGACTTCCTGGAGCACGTTAAACGCTACACGCAA
CGCGAGGCCACGTTTCTGGGCAAGCCGTCTCCCATTTTGGGCGAAATGTT
TGGCGAAATGTTCGAGATTCGTGATTGCAAGCGCTGCATCTTCATCGGGG
ACACACTGGTGCAGGATGTGCAGTTCGGCAAGGCCTGCGGCTTCCAGTCC
CTGCTGGTACTTAGCGGCTGCCTAACAAAGGAGGACATGCTGAACGCCCC
GGTGGAAGCGCAGCCCGGATTACTATGCCGATAGCCTGGCCCGACTTCAC
GCAGCTGCTTGAAAATATTCAAAAGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAGTGGTCATATCATATCATATCATAATCATATCAC
ACTAGCCCTAGAGATCCTGGGTCATGACTGTGCTTGGATTCCTCACCAAA
TAAAAACGCCCGGCGCACCGAGCGTTCTGAACAATCGGATGGAGTCTTAG
GGTCATTACTTGGATCCTAATCTCACACAGC
UFO07512.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2680-RB | 1181 | CG2680-RB | 85..999 | 8..924 | 4535 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2706333..2706857 | 924..398 | 2535 | 99.6 | Minus |
| X | 23542271 | X | 2706953..2707343 | 398..8 | 1955 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:06:07 has no hits.
UFO07512.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:03 Download gff for
UFO07512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2680-RB | 69..996 | 1..932 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:34 Download gff for
UFO07512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2680-RB | 79..1006 | 1..932 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:32 Download gff for
UFO07512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2680-RB | 79..1006 | 1..932 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:32 Download gff for
UFO07512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2706329..2706856 | 399..929 | 99 | <- | Minus |
| X | 2706953..2707349 | 1..398 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:34 Download gff for
UFO07512.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2600362..2600889 | 399..929 | 99 | <- | Minus |
| arm_X | 2600986..2601382 | 1..398 | 98 | | Minus |
