UFO07514.5prime Sequence
1171 bp (1052 high quality bases) assembled on 2011-07-06
> UFO07514.5prime
CAGTCGACATGATCTACTTGATGCGCAAGTGCCTGCAGCTCTTCTGCATC
ATCGAGAACCGCGCCGTTCATCCGGCCGAGGAAGAGGAGAAGGAGGTCAA
GTTGCCGGAAAGGGAGATCCTCCAGAAGCGCCGCGGCGGCTTCACCATCA
TCCCAGCTGCCATGCACCAGAGCATGCACGGCTTCGGCTACGGCGAGGGT
CACTACCAGATCTTTGTGGAGAAGAAGGAGCGTAACCTCCCAACCAAATC
GCGCCTTAACGCGGCCACTGCTGAAGTCAAGCTGAATCCCAATGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCC
TTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCA
TATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCT
GAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTT
TTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGA
AATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCA
TGGAAAACGGTGTAACAAGGGTGAACACTATCCCATATCACCAGCTCACG
TCTTTCATTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGGCAGA
ATGTGAATAAAGCCGGAAAAAACTTGTGCTTATTTTTTCTTTACGTCTTT
AAAAGCGTAATATCAGCTGACGTCTTATTATAGTACTTGAGCAACTGACT
GAATGCCTCAAATGTTCTTTACGATGCCATTGGATATCACCGTGATATCA
GTGATTTTTTCCCAATTACCT
UFO07514.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8960-RB | 659 | CG8960-RB | 167..451 | 9..293 | 1425 | 100 | Plus |
| CG8960-RA | 1016 | CG8960-RA | 524..808 | 9..293 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:06:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2197597..2197881 | 9..293 | 1425 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:06:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 862..929 | 123 | 68.1 | Plus |
UFO07514.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:03 Download gff for
UFO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 524..813 | 9..301 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:35 Download gff for
UFO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 524..813 | 9..301 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:35 Download gff for
UFO07514.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8960-RA | 524..813 | 9..301 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 00:55:35 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:07:35 has no hits.
