UFO07557.5prime Sequence
1144 bp (1027 high quality bases) assembled on 2011-07-06
> UFO07557.5prime
CAGTCGACATGGAATTCTACGATGGCGACCTCAAAGATATATGGGACTCC
GACTTAGATCCGGAATCCTTGAAAATCAGCCCCGATCACGATATGCACGA
CTGGCTGTTCGATCGGGACGTCAAAGATCCCACCGTCATACTCAACGACA
AGCTCATCTCGGATGCCCTGCTCAATGGCACACAGCCGATCAAGACGGAG
CACTCCTACAGTCTCAGCAGCGACGTTGACTCCCTGCCCGATTCACCAAA
AAGCCTCCAGGCCAAGATCGAGGACATGGACGACGAGTGCTTTCCCGCCA
TTTCACCGAAGACGGCGACCAATGGGCGCGTGACCATCGATCCCAAGTAC
CTCACCTTCCACGTCCCGCCCACGCACGCCACGCCCATCAGCCGGCTGAG
CAGCAATCCCGCCCTAAACACCTCCGTCGCGGATCTAACACGATCCTCCG
GCCTGCAGAGCCTGCAGGCGCACCAGCCACACCACGGATCCGGCTCGAGC
CACGTGGTGGTGGCCAATCTGGAGCACTTTCAACTACCTCAGCACCTATA
CGACAACGACTGCAGCTCCTCGGTGTCGTCGTTGCGGGATGGCAGCATGT
CGCCGGACATTTGCTCCGACATCGAGATCGACGAGTCGGCCATCAAGGAT
GAGCCCATGTCGCCGGACTCCAGCTGCCCCGCCAGTCCCACTTCTCAAGC
GAGCAGCTCGCAGCACCAGCTCAGCCTTAATCTGGCCCACCTGCAGTCGG
AAATGCTATTCGAGCCAAAGCACTGTGGCCTCCTGCTAACCGCCAGCAGC
AACAGCAACAACAGCCTCATAAAGTCCCAGCAGCGCCAGCAGCAAATCCT
TGGCCAGGACAATCTACTGATGGCCAAAATGGAGATCAAGAGCGAGAAAC
AGAGCACCAGCAATAGCTCGGACAATCGCATGCCCACGGCTATGGAATCC
CGCTGACGCCACCATCCTCCCTGCCCAGCGATGATTCCGAAGTAACTTAG
TCCGACACCTGTTTGCGCCACTGTCGCCAACGCACGTTTCCATCTCCTGT
GGCATTCCAGCCGGCGGTGAGTCATCCGTTACGGTCAGCGCAACGCTGCC
AGCATCACAACGCCTCGGTCTCGGATTCCGATCAGAATTCGGGT
UFO07557.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CrebA-RB | 4498 | CG7450-RB | 1007..2117 | 8..1109 | 5230 | 98.7 | Plus |
CrebA-RA | 3189 | CG7450-RA | 1007..2117 | 8..1109 | 5230 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15549548..15550045 | 273..770 | 2490 | 100 | Plus |
3L | 28110227 | 3L | 15550145..15550494 | 769..1109 | 1220 | 94.6 | Plus |
3L | 28110227 | 3L | 15547875..15548086 | 62..273 | 1060 | 100 | Plus |
3L | 28110227 | 3L | 15536401..15536456 | 8..63 | 280 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:05:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6779..6946 | 794..961 | 163 | 59.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6876 | 794..930 | 161 | 60.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6692..6926 | 674..920 | 151 | 59.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6891 | 794..930 | 146 | 60.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6866..7042 | 784..948 | 146 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2374 | 794..844 | 144 | 78.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1059..1114 | 789..845 | 129 | 71.9 | Plus |
UFO07557.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:56 Download gff for
UFO07557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CrebA-RB | 981..2114 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:10 Download gff for
UFO07557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CrebA-RA | 1000..2133 | 1..1126 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:14 Download gff for
UFO07557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CrebA-RA | 1000..2133 | 1..1126 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:14 Download gff for
UFO07557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15547876..15548086 | 63..273 | 100 | -> | Plus |
3L | 15549549..15550045 | 274..770 | 100 | -> | Plus |
3L | 15536394..15536455 | 1..62 | 93 | -> | Plus |
3L | 15550147..15550510 | 771..1126 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:10 Download gff for
UFO07557.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15529494..15529555 | 1..62 | 93 | -> | Plus |
arm_3L | 15540976..15541186 | 63..273 | 100 | -> | Plus |
arm_3L | 15542649..15543145 | 274..770 | 100 | -> | Plus |
arm_3L | 15543247..15543610 | 771..1126 | 94 | | Plus |