Clone UFO07557 Report

Search the DGRC for UFO07557

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:75
Well:57
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCrebA-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07557.5prime Sequence

1144 bp (1027 high quality bases) assembled on 2011-07-06

> UFO07557.5prime
CAGTCGACATGGAATTCTACGATGGCGACCTCAAAGATATATGGGACTCC
GACTTAGATCCGGAATCCTTGAAAATCAGCCCCGATCACGATATGCACGA
CTGGCTGTTCGATCGGGACGTCAAAGATCCCACCGTCATACTCAACGACA
AGCTCATCTCGGATGCCCTGCTCAATGGCACACAGCCGATCAAGACGGAG
CACTCCTACAGTCTCAGCAGCGACGTTGACTCCCTGCCCGATTCACCAAA
AAGCCTCCAGGCCAAGATCGAGGACATGGACGACGAGTGCTTTCCCGCCA
TTTCACCGAAGACGGCGACCAATGGGCGCGTGACCATCGATCCCAAGTAC
CTCACCTTCCACGTCCCGCCCACGCACGCCACGCCCATCAGCCGGCTGAG
CAGCAATCCCGCCCTAAACACCTCCGTCGCGGATCTAACACGATCCTCCG
GCCTGCAGAGCCTGCAGGCGCACCAGCCACACCACGGATCCGGCTCGAGC
CACGTGGTGGTGGCCAATCTGGAGCACTTTCAACTACCTCAGCACCTATA
CGACAACGACTGCAGCTCCTCGGTGTCGTCGTTGCGGGATGGCAGCATGT
CGCCGGACATTTGCTCCGACATCGAGATCGACGAGTCGGCCATCAAGGAT
GAGCCCATGTCGCCGGACTCCAGCTGCCCCGCCAGTCCCACTTCTCAAGC
GAGCAGCTCGCAGCACCAGCTCAGCCTTAATCTGGCCCACCTGCAGTCGG
AAATGCTATTCGAGCCAAAGCACTGTGGCCTCCTGCTAACCGCCAGCAGC
AACAGCAACAACAGCCTCATAAAGTCCCAGCAGCGCCAGCAGCAAATCCT
TGGCCAGGACAATCTACTGATGGCCAAAATGGAGATCAAGAGCGAGAAAC
AGAGCACCAGCAATAGCTCGGACAATCGCATGCCCACGGCTATGGAATCC
CGCTGACGCCACCATCCTCCCTGCCCAGCGATGATTCCGAAGTAACTTAG
TCCGACACCTGTTTGCGCCACTGTCGCCAACGCACGTTTCCATCTCCTGT
GGCATTCCAGCCGGCGGTGAGTCATCCGTTACGGTCAGCGCAACGCTGCC
AGCATCACAACGCCTCGGTCTCGGATTCCGATCAGAATTCGGGT

UFO07557.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:15
Subject Length Description Subject Range Query Range Score Percent Strand
CrebA-RB 4498 CG7450-RB 1007..2117 8..1109 5230 98.7 Plus
CrebA-RA 3189 CG7450-RA 1007..2117 8..1109 5230 98.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15549548..15550045 273..770 2490 100 Plus
3L 28110227 3L 15550145..15550494 769..1109 1220 94.6 Plus
3L 28110227 3L 15547875..15548086 62..273 1060 100 Plus
3L 28110227 3L 15536401..15536456 8..63 280 100 Plus
Blast to na_te.dros performed 2014-11-27 00:05:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6779..6946 794..961 163 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..6876 794..930 161 60.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6692..6926 674..920 151 59.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6758..6891 794..930 146 60.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6866..7042 784..948 146 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2374 794..844 144 78.4 Plus
roo 9092 roo DM_ROO 9092bp 1059..1114 789..845 129 71.9 Plus

UFO07557.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:56 Download gff for UFO07557.5prime
Subject Subject Range Query Range Percent Splice Strand
CrebA-RB 981..2114 1..1126 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:10 Download gff for UFO07557.5prime
Subject Subject Range Query Range Percent Splice Strand
CrebA-RA 1000..2133 1..1126 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:14 Download gff for UFO07557.5prime
Subject Subject Range Query Range Percent Splice Strand
CrebA-RA 1000..2133 1..1126 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:14 Download gff for UFO07557.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15547876..15548086 63..273 100 -> Plus
3L 15549549..15550045 274..770 100 -> Plus
3L 15536394..15536455 1..62 93 -> Plus
3L 15550147..15550510 771..1126 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:10 Download gff for UFO07557.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15529494..15529555 1..62 93 -> Plus
arm_3L 15540976..15541186 63..273 100 -> Plus
arm_3L 15542649..15543145 274..770 100 -> Plus
arm_3L 15543247..15543610 771..1126 94   Plus