UFO07558.5prime Sequence
1106 bp (1013 high quality bases) assembled on 2011-07-06
> UFO07558.5prime
CAGTCGACATGAGCATCTCGGCGGTGGATCGCAAAGAGCCGGGCAGTGTG
AGCAGCGGTCTGGGTAGGCGATACGGGCAGCTGCTCCGTGGAGCCAAGTA
CACAGATTGCGTGTTCCACGTGTGCGAGGAGCAAGTGAAATGCCACAAGC
TCATCCTGAGCTCCGCCAGTCCCGTTTTCGAGGCAATGTTCTTTGGTCCC
ATGCAAAACAACGAGCCCGAGCCGGAAATCGAAATCCACGACATAAGCTC
TGCCATCTTCAAGGTGCTGGTGGAGTACATCTACACGGGCGTCGTTGACT
ACAATGGCCTGGAGCTGGTGGCCTGCATTGAGCTGTACTACGCCGCTGAG
AAGTATCTGCTGGAGGAGCTGATCGCCGACACGCTGATGGTTATCACCCG
CAAGCTGCGATTTGCCAATATCTTGCCCGCTCTAGAGCTAAGTGTTTGCA
TGGGCCTCGACGGGTTGCTGGAGGTCTGCATGACCTTTTTCATGCGATGC
TGTGTTAATAATGGACAGTATATGAGCCACCTTAAGGAGCACTATGTGCA
CGTGTCCAAGGAGTGTGTGAAGGCCATAATAGCGGCGTGCAAGGAACCGC
ACAAGTTACTCATCTGGTATGTTTATGAGTGGACACGACAGGAGTGCGAG
CAGTTGGGTCTGGGTCCCAGCGATGCCGACTTAGTAGTGCACGACTTGGG
TGGCAAAACAAGCGACTGGCCTGCGGCTTCGGGTGCTAGTGATTTGGAAT
CACCTGCCCTAACTCCGGTGGTTTTGGTGGAGCGCTGCTATTACAAGGCC
TGCAGCCCTTTACAGTGGATGCAGAAACTCCGCTGTTTCGCTTGCGTCTA
AAGTGCTCTAGATTTATCTCCTTGATGGGCTTGGTCCTGAACAGCACGCT
GACTCCCAACCTATTGGGTCACGTCCAGCAGCTGGAGTACGCGAATCGCT
GCGGCTGGACCTTTGCGAGGTGCCGCTGAAAGCGAGGTCCGGCACGTCGC
CCGTATGGAGTCACGTTGTCAAGCCAGAAATACCAAGTACAACTGCAACT
GCATTCTTGCTGGCACGCGTAGAAGCTGGTGTGCTTGATCGGACCTAACA
TATGAC
UFO07558.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11275-RA | 1664 | CG11275-RA | 298..1403 | 9..1105 | 5065 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22181276..22182322 | 9..1049 | 4845 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:05:19 has no hits.
UFO07558.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:18:57 Download gff for
UFO07558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11275-RA | 299..1371 | 9..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:13 Download gff for
UFO07558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11275-RA | 298..1370 | 9..1073 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:16 Download gff for
UFO07558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11275-RA | 298..1370 | 9..1073 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:16 Download gff for
UFO07558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22181267..22182348 | 1..1073 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:13 Download gff for
UFO07558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18068772..18069853 | 1..1073 | 98 | | Plus |
