UFO07566.5prime Sequence
1148 bp (1028 high quality bases) assembled on 2011-07-06
> UFO07566.5prime
CAGTCGACATGTCCAATCAGGCACCCTGGCCCGTTCGCAAGGGCATCTTC
CGCTCGAGCGGTCAGTCGGATTTCACGCCAACCCGATCGCCTAGTCCCAT
TGTGGAGATGCCATTATCCCCGCCGCCGGTGGCCACGCCCTCGAATAGAT
TTGGAATCAATTCACCGCTCTCCCCACCGCCGCAGCCTATTCAAGTGGTG
GCGGGTTCAACGACAGCCACTACCATGTCCACTGCGTCCGCTGCCAGAGT
GTCTGGTGCAGCTGCCTCCACTTCATCCTCGTCCTCCTCTTCTTCGTCGT
CGCAGTGCTCGTCGCAAACCTCGTCGAGTTCTAGTTCGCACACCAGAGTA
CGTAAAAGTTCTAACCCGCCCCCACAGCCAATTACCAGTTGTCCACTGTC
GCCACCACCACCACCACCACCACAGCAACAACAACAACTACCACAACAAC
TGCCACCTCCAACGCCCATCAACAACACCAACCACTCAGCAATTACAACA
CCCAATCACAACAATAACCACAACTGCAATCAAATGAGAAATGTACGCGA
AATTCCCATTGAGGTGGAGCAGAGCAAGGAAGCCCTCTCACTCCGCACCG
GCGACATCACACAGCAGGCGAGCAACAATGTGGCGGCCTCCAGTATTACG
GTGCAAAGTGAGAATTTCTCCGCGGACAAGAAGGCGATATCCCAGTCGCA
GCAATCGCAGACGATGACCTCCAACGGGATCATCAGTCAGAGAAACATGT
ATCCTCCGCCTCGCAGCCAACTACTCGATGTCGCACAAAGGGCGTTTCCA
GTACCGGCAGTAGCATGATCACCAGCTCCTCGCAAATGTCCGCGATGAAT
GGGCCAGATGCTGAAGCTCGCCGATCTCAAGTTGGATGACCTCAAGTCGC
TGACAGCTGGCAGTGGGCAGCAGAGATCGAGCAGACCATCAACAAGTATT
CCAATATGCTGACCTCAATAGTGAGCTCCCTGCAGAGATGAGCGGAGGTG
GTAGTGCCATACCGTCCACGATGTTGGTGCAAGAAGTCTCAGTACCTGCA
GAAAGATCAACGAAGTCATTCGTCGAGCTGGCAGTGCCCACACATGGCCA
CGACTGGGCTACTCTATGTGCAAATTCCTGCCCAAGGTTGGCGCCTCG
UFO07566.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ect4-RE | 4907 | CG43119-RE | 354..1500 | 9..1148 | 5255 | 98 | Plus |
| Ect4-RJ | 3837 | CG43119-RJ | 1120..1699 | 576..1148 | 2420 | 96.1 | Plus |
| Ect4-RI | 6741 | CG43119-RI | 3113..3692 | 576..1148 | 2420 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8101992..8102562 | 9..579 | 2855 | 100 | Plus |
| 3L | 28110227 | 3L | 8102891..8103451 | 577..1131 | 2105 | 96.5 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:05:48 has no hits.
UFO07566.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:00 Download gff for
UFO07566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RE | 354..1490 | 9..1138 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:23 Download gff for
UFO07566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RE | 354..1490 | 9..1138 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:25 Download gff for
UFO07566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ect4-RE | 354..1490 | 9..1138 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:25 Download gff for
UFO07566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8101992..8102561 | 9..578 | 100 | -> | Plus |
| 3L | 8102893..8103431 | 579..1111 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:23 Download gff for
UFO07566.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8095092..8095661 | 9..578 | 100 | -> | Plus |
| arm_3L | 8095993..8096531 | 579..1111 | 97 | <- | Plus |
