UFO07574.5prime Sequence
1158 bp (1030 high quality bases) assembled on 2011-07-06
> UFO07574.5prime
CAGTCGACATGTGCCAACAAGTCGTTGTCGTCGCCAACACCAACAACAAG
ATGAAGACCAGCTACAGCATCAAGCAGGTCCTGAAGACGCTCTTCAAGAA
GCAACAGAAGCAGCAGCAGAAGCCTCAGGGATCTCTGGAATCGCTAGAAT
CCGTCGACAATCTGCGCAACGCCCAGGTTGAGGAGGCCTACTATGCCGAG
ATCGATGAGAACGCCGCCAACGAGAAGCTGGCCCAATTGGCTCACTCTCA
GGAGTTCGAGATTGTCGAGGAGCAGGAGGACGAGGAGGATGTCTATGTCC
CAGTTCGCTTCGCTCGCACCACCGCCGGCACCTTCTTCTGGACCACCAAC
CTTCAGCCAGTCGCCAGCGTTGAGCCCGCCATGTGCTACTCCATGCAATT
CCAGGATCGTTGGGCCCAGGCTGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
ATAAACCCTTTAGGGAAATAGGCCAGGTTTCACCGTAACACGCACATCTT
GCGAATATATGTGTAGAACTGCCGGAATCGTCGTGTATCACTCAGAGCGA
TGAAAACGTTTCAGTTTGCTCATGGAAACGGTGTAACAAGGGTGAACACT
ATCCCATATCACCAGCTCCACGTCTTTTCATTGGCATACGAATCGGAAGG
ACATCATCAGGGCGCAGATGTGATTAGCGAGAATAAACTGGCTATTTTCT
TACGGTCT
UFO07574.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:06:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| E(spl)malpha-BFM-RA | 676 | CG8337-RA | 71..484 | 9..422 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:06:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26010963..26011376 | 9..422 | 2070 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:06:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1070..1101 | 96..127 | 115 | 84.4 | Plus |
UFO07574.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:05 Download gff for
UFO07574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| malpha-RA | 71..488 | 9..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:07:39 Download gff for
UFO07574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)malpha-BFM-RA | 71..488 | 9..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:37 Download gff for
UFO07574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| E(spl)malpha-BFM-RA | 71..488 | 9..427 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:37 Download gff for
UFO07574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26010963..26011375 | 9..421 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:07:39 Download gff for
UFO07574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21836685..21837097 | 9..421 | 100 | -> | Plus |
