UFO07605.5prime Sequence
1120 bp (1029 high quality bases) assembled on 2011-07-08
> UFO07605.5prime
CAGTCGACATGAGGTCATCATCGTGCCAGCTGGTGACTCTGGGCGTTCTG
CTGGCCATCTGTTCCCTGGGTCAGGGACAATTCAAGACGGCTGGCATCAA
GACACGGCAGCCGCCATCGGGAAACCTGCAGCTTGCCGGCAATAGCAGTG
AGTCGGGATGGAGGAGCTACAACCAGAGCAGCTACGGTTGGAGCACTCAA
AACCAGAGCAACTACGCCTGGAACCAGCAGAACCATGTGGAACAGGGATC
CGCTGGATTTGTGCGCGCCGAGGTCTTTCAACCGGTCACATTGCCGCCCC
TTTATGGACACTACGTGCAGCCGGTGACTCCGCCCGCTCATCGTGTCCAG
GTCCTGGATGAAACGGCCCTGTTCATCAACAAAACCAGATCTGCCATGGC
CAGTGGTGTGTGCTACAAGGATGTTCCAACCGCGTCACTGCTCCGCAATT
CGCGGGATCAGTTCGTTGGCAATGGCACCACTCCGGACATGAGTCGCATC
CAAGTCTGCTGCGATGGCTATGAGCGAAATCCGCACATCTACCGCCGCTG
TGAGCCGATCTGCGCGGATGACTGCCGGAATGGAATATGCACTGCTCCGA
ATACCTGTGTCTGCATACCCGGCCACGTTCGCACCGCCGAGGGCAAGTGC
ATCTCCACCTGTCCCCTGGGCTGCGGCAACGGAGTGTGCGACGAGCGGAA
TGAGTGCAAGTGCCGCGAGGGATACTCGCTTGAGCCGGAGACTCGTAAGT
ACTGCCAGCCGGAATGCAAGCCCGGCTGCTCCTTTGGACGCTGTGTGGCG
CCCAACAAGTGCGCCTGCCTCGACGGATACCGCCTGGCCGCCGATGGATC
CTGCGAACCAGTGTGCGACAGTTGCGAGAATGGCAAGTGCACGGCTCCAG
GACACTGCACTGCAACGCAGCTACCTAAGCTCCAGGACGCTGCGAACCCA
TTTGCTCCATACCCTGCAAGACGGACGCTGCATTGGACGGACATCTGTGA
GTGCGCTTCCGGTTCGAGTGGGACGGAAGTCGCCGAGTTTCTGCCGAAGT
GGTGACTCGTGCTTGACGGCGTTCTGTTGTGGCAACACATGCGACTTGCA
AGAACGGATTTGGGAGACAT
UFO07605.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimB2-RA | 1435 | CG31839-RA | 94..1215 | 8..1116 | 5050 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13965475..13966011 | 960..428 | 2485 | 99.3 | Minus |
| 2L | 23513712 | 2L | 13966506..13966925 | 427..8 | 2085 | 99.8 | Minus |
| 2L | 23513712 | 2L | 13965301..13965396 | 1051..961 | 215 | 93.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:08:43 has no hits.
UFO07605.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:24 Download gff for
UFO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nimB2-RA | 92..1174 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:45 Download gff for
UFO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimB2-RA | 88..1170 | 1..1072 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:32 Download gff for
UFO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimB2-RA | 88..1170 | 1..1072 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:32 Download gff for
UFO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13965475..13966011 | 428..960 | 99 | <- | Minus |
| 2L | 13966506..13966931 | 1..427 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:45 Download gff for
UFO07605.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13965475..13966011 | 428..960 | 99 | <- | Minus |
| arm_2L | 13966506..13966931 | 1..427 | 99 | | Minus |
