UFO07614.5prime Sequence
1156 bp (1030 high quality bases) assembled on 2011-07-08
> UFO07614.5prime
CAGTCGACATGGCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATA
GCGAGTTCCTTCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCT
GGCCGTGCTTTACTACACCGACTGGAAGCTGGTCCTACAGTACGTGCCCA
TCTACGGATCCAAGTTCGAAAAAAGCGAGGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCTTTTCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACG
CCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGGTAT
TCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTA
ACAAGGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATTGCCA
TACGAAATTCCGGATGAGCATTCATCAGCGGGCAAGAATGTGAATAAAGG
CCGGATAAACTTGTGCTTATTTTTTCTTTACGGTCTTTAAAAGGCCGTAA
TATCCAGCTGAACGGTCTGGTTATAGGTACATTGAGCAACTGACTGAATG
CCTCAAAATGTTCTTTACGATGCCATTGGGATTAATCAACGGTGGTATAT
TCCAAGTGATTTTTTCCCCATTTAGCCTTCTTAGGCTCCTGAAAAGAATC
CTTACTTCGGTATAGGCATACCTTATACGGAGTTTAGATTCAAATTATTG
AGCATT
UFO07614.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14482-RB | 561 | CG14482-RB | 81..251 | 9..179 | 855 | 100 | Plus |
| CG14482-RA | 324 | CG14482-RA | 81..251 | 9..179 | 855 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17572406..17572523 | 179..62 | 590 | 100 | Minus |
| 2R | 25286936 | 2R | 17572652..17572704 | 61..9 | 265 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:09:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 748..815 | 123 | 68.1 | Plus |
UFO07614.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:26 Download gff for
UFO07614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14482-RA | 51..228 | 9..187 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:53 Download gff for
UFO07614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14482-RA | 81..258 | 9..187 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:39 Download gff for
UFO07614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14482-RA | 81..258 | 9..187 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:39 Download gff for
UFO07614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17572406..17572523 | 62..179 | 100 | <- | Minus |
| 2R | 17572652..17572704 | 9..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:53 Download gff for
UFO07614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13459911..13460028 | 62..179 | 100 | <- | Minus |
| arm_2R | 13460157..13460209 | 9..61 | 100 | | Minus |
