UFO07619.5prime Sequence
1152 bp (1053 high quality bases) assembled on 2011-07-08
> UFO07619.5prime
CAGTCGACATGAAAAGAGCGGCCGAAATGGACGAATTGACGTATCAGACA
GCTGTAAAAAAGGCCCAACTGGTTGAGAGGAATCCCCAGTTGCAGATAAA
CCCCATGCGTGTGTCCATGCACCAGGAGGAGGATATCATCGAATTGGCCC
AACAAATTCAGAATGCTGATAAACAATTGAAAAACACAACTTGCCAAAAG
CTGGGGGTCATAATGGAGCAGATCAAAATGCTTCAGGCCCAAGCGATGGA
GATACTTAAGGAGTCCACTCTCAACCGAGATCTGCACAGTGCGGCCTGCA
ATTTCACCAAAAAACCCGGACACATCTATCATCTTTATCAAAGGCCATCG
GGTCAAAACTATTTCAGCATGCTATCACCGGAAGAATGGAGTCTCTCCGT
TGACCAAACATTCAAAGGCAGTTTCAGGTTGGAGTACGATTTGAGCTGGA
CCCCACTGGACAAGATTAAGGAGCAGGATGAGAAGCTAAAGTGGGCGGAG
CAGTGCATGCTAAAGGCACTAGATGGTGGGCGTGGTTCGGCCATGGCAAT
TGACTTTAATATAAGCAATGATGCAAGCTTTCTAGACCATTCGTTTGGCG
CGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAAT
CACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACC
AATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGA
GTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGAT
ATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGG
TGAAACGGGGGCGAGAGTTGTCCATATTGCCACGTTTAAATCAAACTGGT
GAACTCACCCAGGATTGGCTGAACGAAAAACATATCTCAATAACCCTTTA
GGAATTAGGCCAGGTTTCACCGTAACCCCGCCCCATCTGGCGAATTATTA
TTGTGTAGACTGCGAAATTCGGTCTGGCATTAACTCGAGCGATGAAACCG
TC
UFO07619.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31800-RA | 751 | CG31800-RA | 103..666 | 9..572 | 2790 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19033742..19033930 | 572..384 | 915 | 98.9 | Minus |
| 2L | 23513712 | 2L | 19033988..19034152 | 384..220 | 825 | 100 | Minus |
| 2L | 23513712 | 2L | 19034205..19034363 | 221..63 | 795 | 100 | Minus |
| 2L | 23513712 | 2L | 19034420..19034474 | 63..9 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:09:12 has no hits.
UFO07619.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:28 Download gff for
UFO07619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 1..546 | 27..572 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:57 Download gff for
UFO07619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 97..666 | 1..572 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:42 Download gff for
UFO07619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31800-RA | 97..666 | 1..572 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:42 Download gff for
UFO07619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19034420..19034480 | 1..63 | 93 | | Minus |
| 2L | 19033742..19033930 | 384..572 | 98 | <- | Minus |
| 2L | 19033989..19034150 | 222..383 | 100 | <- | Minus |
| 2L | 19034205..19034362 | 64..221 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:57 Download gff for
UFO07619.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19033742..19033930 | 384..572 | 98 | <- | Minus |
| arm_2L | 19033989..19034150 | 222..383 | 100 | <- | Minus |
| arm_2L | 19034205..19034362 | 64..221 | 100 | <- | Minus |
| arm_2L | 19034420..19034480 | 1..63 | 93 | | Minus |
