UFO07623.5prime Sequence
1145 bp (1043 high quality bases) assembled on 2011-07-08
> UFO07623.5prime
CAGTCGACATGAGCAGCACTGGTGTTGCAAGTAGCAGCACAACAGCCGAA
GAGGATTGGCCCACGGCCGTTGAGTTTGTGATTATGACAACGCCCGCAAG
CGAATTGGAAGCCAGCACGGAAACCATTGGTAACAATGGCACCACCGAAA
CGACCGTTGGCGAGGCACCCATCATCGGATCGTCGGAAGGATCCACACGA
TCGATGGAGCCAACCACCGCGAGTCCGCTGATGAGCACAAACCCATCGAG
CAGCAGCAGTCTGGTTAGCACCATTCCCTTGCCACCGACAGCGGGACTGC
CTGTGCAGGATAATCAGCCAGTGCCGTGCACATGCGGCGTCTTCCTCTCC
TCGCAAATCCCAAATGGCTTGCCGACAAAGCCACTTATCCACCAGGAATT
GGATCATATGTTTCCCTGCAATGCCATCGGTCGCAAGCAGTGTCAAACCA
AATGCCTAGAGACGATCGTACAACATCTGCCGAATTCCGCAAATATAGTA
TGCTCCGCACTGGGTCACGATTGTCACAAGGAACGGGCCTATTTGTTCAT
CAAGAACTGTCACAATCAATGGGTTAATACCAATCTGCAGGCGGGCAGGG
AGTACTGTTGTCGCTCTGGCGTTCCCTACCGTTGCCCATTGATGGGTGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAAATATTTGCCCATGGTGAAACGGGGCGAAGAAGTTGTC
CATATTTGGCACGTTAAATCAAACTGGTGAACTTCACAGGGATGCTTGAA
ACGAAAAAACTATTCACAATAAACCTTAAGGAAAATAGCCAGCGC
UFO07623.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Fcp3C-RA | 963 | CG4015-RA | 287..926 | 8..647 | 3200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 3173668..3174124 | 464..8 | 2285 | 100 | Minus |
X | 23542271 | X | 3173413..3173596 | 647..464 | 920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:08:57 has no hits.
UFO07623.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:26 Download gff for
UFO07623.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fcp3C-RA | 1312..1962 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:50 Download gff for
UFO07623.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fcp3C-RA | 281..931 | 1..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:38 Download gff for
UFO07623.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Fcp3C-RA | 281..931 | 1..653 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:38 Download gff for
UFO07623.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 3173408..3173595 | 465..653 | 98 | <- | Minus |
X | 3173668..3174130 | 1..464 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:50 Download gff for
UFO07623.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 3067441..3067628 | 465..653 | 98 | <- | Minus |
arm_X | 3067701..3068163 | 1..464 | 99 | | Minus |