Clone UFO07623 Report

Search the DGRC for UFO07623

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:76
Well:23
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07623.5prime Sequence

1145 bp (1043 high quality bases) assembled on 2011-07-08

> UFO07623.5prime
CAGTCGACATGAGCAGCACTGGTGTTGCAAGTAGCAGCACAACAGCCGAA
GAGGATTGGCCCACGGCCGTTGAGTTTGTGATTATGACAACGCCCGCAAG
CGAATTGGAAGCCAGCACGGAAACCATTGGTAACAATGGCACCACCGAAA
CGACCGTTGGCGAGGCACCCATCATCGGATCGTCGGAAGGATCCACACGA
TCGATGGAGCCAACCACCGCGAGTCCGCTGATGAGCACAAACCCATCGAG
CAGCAGCAGTCTGGTTAGCACCATTCCCTTGCCACCGACAGCGGGACTGC
CTGTGCAGGATAATCAGCCAGTGCCGTGCACATGCGGCGTCTTCCTCTCC
TCGCAAATCCCAAATGGCTTGCCGACAAAGCCACTTATCCACCAGGAATT
GGATCATATGTTTCCCTGCAATGCCATCGGTCGCAAGCAGTGTCAAACCA
AATGCCTAGAGACGATCGTACAACATCTGCCGAATTCCGCAAATATAGTA
TGCTCCGCACTGGGTCACGATTGTCACAAGGAACGGGCCTATTTGTTCAT
CAAGAACTGTCACAATCAATGGGTTAATACCAATCTGCAGGCGGGCAGGG
AGTACTGTTGTCGCTCTGGCGTTCCCTACCGTTGCCCATTGATGGGTGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGAAGCCA
TCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTC
GCCTTGCGTATAAATATTTGCCCATGGTGAAACGGGGCGAAGAAGTTGTC
CATATTTGGCACGTTAAATCAAACTGGTGAACTTCACAGGGATGCTTGAA
ACGAAAAAACTATTCACAATAAACCTTAAGGAAAATAGCCAGCGC

UFO07623.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
Fcp3C-RA 963 CG4015-RA 287..926 8..647 3200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:08:55
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3173668..3174124 464..8 2285 100 Minus
X 23542271 X 3173413..3173596 647..464 920 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:08:57 has no hits.

UFO07623.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:26 Download gff for UFO07623.5prime
Subject Subject Range Query Range Percent Splice Strand
Fcp3C-RA 1312..1962 1..653 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:08:50 Download gff for UFO07623.5prime
Subject Subject Range Query Range Percent Splice Strand
Fcp3C-RA 281..931 1..653 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:38 Download gff for UFO07623.5prime
Subject Subject Range Query Range Percent Splice Strand
Fcp3C-RA 281..931 1..653 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:38 Download gff for UFO07623.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3173408..3173595 465..653 98 <- Minus
X 3173668..3174130 1..464 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:08:50 Download gff for UFO07623.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3067441..3067628 465..653 98 <- Minus
arm_X 3067701..3068163 1..464 99   Minus