UFO07632.5prime Sequence
1114 bp (1003 high quality bases) assembled on 2011-07-08
> UFO07632.5prime
CAGTCGACATGCATCTAAACGAGAACACCAAAATACTGGGTCACAGGGTC
ATCCTTGTGCCCTACGAAGCGCGCCACGTGCCCAAGTACCACGAGTGGAT
GAGCAACGAGACCCTGAGGGAGTTGACCGCATCCGAGGAACTGACCTTAG
AAGAGGAGCACGAGATGCAAAGGAGTTGGAGGGAGGACAGCGACAAGCTG
ACCTTCATTGTCCTGGATGCAGAGACTTATTCGCGTGATCAGGATGAGAT
TGCCGCCATGGTGGGCGACACCAATCTCTTCCTGCACCAAGATCCCGATA
GCCAGATACCAACGGCGGAGGCGGAAATCATGATTGCCGAACCTTATGCA
CGGGGCAAGGGATTCGGCAGGGAAGCCATGCTCCTCATGCTCAAGTACGC
CCAATCGCAGCCCCAGCTTAAATTGGATAAATTCGAGGTCAAGATCGACA
TGGACAACGCTGCATCGCTGCATTTGTTTAAGAGTTTTATGTTCGTGGAG
ACGCGTCGAGTGGAGATCTTCCACGAGGTCACCCTGGAGCGACCTATCAC
TCCAGATTGGATCAACTGGCTGGACCAGCAGGTGGATCTGCGTATGCAGT
GCTATCAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATC
AGCACTTGTCGCTTGCGTATATATTTGCCCATGGTGAAACGGGGCGAGAG
TGTCATATTGCCACGTTTAAATCAAAACTGTGAACTCACCAGGAATGCCT
GAAACGAAAAACTATTCTCATAATCCGTAAGAATAGGCAAGCTTCACGTA
ACGCCAACTTGGCA
UFO07632.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11539-RB | 810 | CG11539-RB | 91..690 | 9..608 | 3000 | 100 | Plus |
| CG11539-RA | 737 | CG11539-RA | 18..617 | 9..608 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31615404..31616003 | 608..9 | 3000 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:09:53 has no hits.
UFO07632.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:34 Download gff for
UFO07632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11539-RA | 15..621 | 2..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:17 Download gff for
UFO07632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11539-RA | 15..621 | 2..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:59 Download gff for
UFO07632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11539-RA | 15..621 | 2..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:59 Download gff for
UFO07632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31615399..31616006 | 2..612 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:17 Download gff for
UFO07632.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27441121..27441728 | 2..612 | 99 | | Minus |
