UFO07634.5prime Sequence
1108 bp (1031 high quality bases) assembled on 2011-07-08
> UFO07634.5prime
CAGTCGACATGCTATTGTCAGAGGATCGCTTGGAGCACTACAAAACCAGT
TTGGAGCAGCAGTTAAAGCATTTGGCCACCACCATAAGGAGCTATCTATG
CCTTAAGTCTGCGACGACGCCTCAATTGTCGAACCAAGCGAATCGGTTGT
GGGAATTGGGCCAACGTTATCGACTGGTCACGGGTTCCAATCAAGTTGCC
ACATTTGCGCTTCTTTCGGTGTGCCACGATGTTTACCGTAGCCTGCAGGA
CAGCATATCGAAACTGGTTTCCGAGCTAGGGCAGATATCCGCCCAAGTAA
CTGACTTCGAGATTGAGTGCCTGCACCTATGTAATGAGCAGCAGCAAACC
AAAACACCTGCAGCATTGACAGAATTCAGAAATTTCCTGGAGGAATCGCT
GAAACTGCTGCAGAACCAGGTTAAATACCTAGAGCTTCATCTTAGTCAGC
TGCAACCCAAGTTTTCCGCACCCGAATCCTCGTTGGAGTCCTTCAAATCC
GATCTCCAACTGCCGGAACCTGCAGAAGCACGCATTACCCTTGGATTGGC
CAAAATAGAGAGACTGTCCAGTTTTCCGCTGACTTTGGCAAGCTTTCTAG
ACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCAT
AATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGT
GCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGA
ACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGT
CCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGT
ACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACG
GCATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCTTGCGTAT
ATATTTGCCCATGGTGAAACGGGGCGAGAGTGTCATATGCCACGTTTAAT
CAACTGGTGAACTCACCAGATGCTGAAACGAAAAATATTTCTCAATAATC
TTTAGAATAGCAGTTCACGTAACCGCCATCTTGCCAATAATGTGTTAGAA
CTGCCGAA
UFO07634.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15317-RA | 825 | CG15317-RA | 69..647 | 9..587 | 2895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9555785..9556115 | 587..257 | 1655 | 100 | Minus |
| X | 23542271 | X | 9556301..9556476 | 184..9 | 880 | 100 | Minus |
| X | 23542271 | X | 9556175..9556247 | 256..184 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:09:21 has no hits.
UFO07634.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:29 Download gff for
UFO07634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15317-RA | 67..647 | 5..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:02 Download gff for
UFO07634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15317-RA | 67..647 | 5..587 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:46 Download gff for
UFO07634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15317-RA | 67..647 | 5..587 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:46 Download gff for
UFO07634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9555785..9556115 | 257..587 | 100 | <- | Minus |
| X | 9556175..9556246 | 185..256 | 100 | <- | Minus |
| X | 9556301..9556478 | 5..184 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:02 Download gff for
UFO07634.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9449818..9450148 | 257..587 | 100 | <- | Minus |
| arm_X | 9450208..9450279 | 185..256 | 100 | <- | Minus |
| arm_X | 9450334..9450511 | 5..184 | 98 | | Minus |
