UFO07636.5prime Sequence
1102 bp (1057 high quality bases) assembled on 2011-07-08
> UFO07636.5prime
CAGTCGACATGGAGTTACGCAGCCGAACAAACAGGAGATTAGTTGACTTC
CTCAAAAGCGCAGGCGTTTACGAGGAAGGCATGGATATTGAGGAAATGAC
CGAATTAGCAAGTGTCGTGCAGCAATCAGCTAGTATCAGTCCCCAGGATG
AGGATCTAGAAAGGGCTCTGCACGAGAGCGAGTCTGATTTTTTGACTTCG
CATCCCAGTGCTTTGCACAACTCCACGATGATCATGTCGCCGCAAGTGTC
CAGAAGAAATCCCTCAGACATGGACAGTCCACCGAGCGAGCCGATCCGTA
TAACTTTTCGGGCTTTGGTGCACCGTGCCATGGACTGGAGTCCCACCACG
GGCAATCAAATTCCCGATCGCAAGCGCATTGCTGCGGATCGCAATCAAAA
CGTCGAACTAGTTGGCAATTGTTCCAGAGCAACGCCGGCTATCAGCATTG
GCCAGGCACCGGAGGATGAGCCGCACAATGCCGACGCCACACCCGTTTCC
CCGGGCAACGAATGCGACTCCGGCGTCAGCTGGGAGGAGATATCTTTGTC
CAGCGCCAGCGATAGCACCACTCTTCCTTCCATCGGCGAAATGCCCGATC
GACATTTAATCAGCACCAGCAGCGTCGCCGTCTCGGATTTCTCAGATGCC
AATGAAATCAGCCAGGAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTTAG
CATTCTGCCGACATGGAAGCCATCACAAACGGGCATGATGAACCTGAATC
GCAGCGGCATCAGCATCTTGTCGCTTGCGTTATAATATTGCCCATGTGAA
AACGGGGGCCGAAGAGTTTGTCCATATTGGCCCACGTTTAAATCAAACTT
GT
UFO07636.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14931-RB | 912 | CG14931-RB | 106..765 | 9..668 | 3270 | 99.7 | Plus |
| CG14931-RC | 1024 | CG14931-RC | 209..877 | 9..668 | 3170 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:09:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11788834..11789328 | 174..668 | 2445 | 99.6 | Plus |
| 2L | 23513712 | 2L | 11788653..11788769 | 58..174 | 585 | 100 | Plus |
| 2L | 23513712 | 2L | 11788542..11788591 | 9..58 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:09:26 has no hits.
UFO07636.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:30 Download gff for
UFO07636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 74..747 | 1..675 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:04 Download gff for
UFO07636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 98..771 | 1..675 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:49 Download gff for
UFO07636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14931-RB | 98..771 | 1..675 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:49 Download gff for
UFO07636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11788534..11788590 | 1..57 | 92 | -> | Plus |
| 2L | 11788653..11788768 | 58..173 | 100 | -> | Plus |
| 2L | 11788834..11789334 | 174..675 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:04 Download gff for
UFO07636.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11788534..11788590 | 1..57 | 92 | -> | Plus |
| arm_2L | 11788653..11788768 | 58..173 | 100 | -> | Plus |
| arm_2L | 11788834..11789334 | 174..675 | 99 | == | Plus |
