UFO07641.5prime Sequence
1161 bp (1034 high quality bases) assembled on 2011-07-08
> UFO07641.5prime
CAGTCGACATGGATTCGCTGCTCCAGAAGATCTCAGAGCTGTTTCATAAC
TTTACTTCCCCCATTGCAGCGGTGGTATACAGTCCTAAGAATGTAGAGAA
TGCACAAGAAACCCAAACCACTGCAAACCAAATACCAGAAGCTTCGAGCC
AGGAAACTGGGAAGCCGGACTCTGATCGAACTGCACCTGATACCACTGAA
CCCCTAACCTCTGGTGATATTCCAACCCCAGATGTCAAGTTGCAAAAGTT
TAGGGAACAAACGGCTCCAGCTTTAAACTACGAGCTAGAGTTTGTTGACT
TCGTAGATCGCAACGCACCTCAGGGTCTATCGAAGAAGATAATTGATATA
TTGCCCTATCTGGAGGTCAGCTTTTTGTCCTGGCCAGCGTTTTGGATTTG
GCGCGGCTACAACTGGCAGTCCGCACGAAAAACGGAGAGAATCGCATTTT
ACATTCAAAGGACCTATCAACAGGCCAAGCTAATGCAGTTGGCTATCTTA
GCCACTGGTCTGTTCACGATATCAATGGGTCGACCTGCCGGCATACCAAT
AGAAATGCATACAGTGCACAATAATCAGGAAGAAACAGCTGACATCGGAG
ACTCCTCTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGACCTGATCGCCAGCGGCATCA
GCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAACGGGGGCGAA
GAAGTTGTCATATTGGCCACGTTTAAATCAACTGGTGAACTCCACCCAGG
GATTGGCCTGAAACGAAAAACTATTTCCTCAATTAACCTTAGGGAAAATA
GCAAGTTCACCGTTAACACGCCCCATCTCTGGCAATTATTGTGTGAACTG
GCGGAATTCGT
UFO07641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32299-RB | 1205 | CG32299-RB | 54..654 | 8..608 | 3005 | 100 | Plus |
| CG32298-RB | 1205 | CG32298-RB | 54..654 | 8..608 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2390483..2390936 | 461..8 | 2270 | 100 | Minus |
| 3L | 28110227 | 3L | 2390277..2390424 | 608..461 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:10:20 has no hits.
UFO07641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:38 Download gff for
UFO07641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32299-RB | 51..659 | 1..616 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:28 Download gff for
UFO07641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32298-RB | 51..659 | 1..616 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:09 Download gff for
UFO07641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32298-RB | 51..659 | 1..616 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:09 Download gff for
UFO07641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2390272..2390423 | 462..616 | 97 | <- | Minus |
| 3L | 2390483..2390939 | 1..461 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:28 Download gff for
UFO07641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2390272..2390423 | 462..616 | 97 | <- | Minus |
| arm_3L | 2390483..2390939 | 1..461 | 99 | | Minus |
