Clone UFO07643 Report

Search the DGRC for UFO07643

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:76
Well:43
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO07643.5prime Sequence

1140 bp (1044 high quality bases) assembled on 2011-07-08

> UFO07643.5prime
CAGTCGACATGTGGGTAAGCCTGGTTAGAAATCACAGCAGTTGGGGAATT
AGCAAAATGGGCAAATCGCAAAATAATACTGGTTCGCTTTTGCTACTGAT
TATACTGGGCATTTCTCTGGGAGATTCCATGCCCCTGGAGGATATGGACT
CCCAGGAAATGATTGACTTGACAGATCTTGGAGATACTCTGTTCGGTAAT
CCGGACGTGGAGACGACTGGAGCTTTGGTTGAGGCACTCGGTGTGGAATC
CCCGCTGAATCCCGAGGAGCTGGGAACCTACCACGAAGGTGACATCCTGA
TTCCACTGAGCTACAGGGACGCCCGATTCAATGGCACTCGTAATGGCATT
TTGGCGCTGAGTTCCCGCTGGCCGGGCGGCGTTGTGCCCTACGAGATCAA
AGGTCCTTTTACCAGCCTTGTTTTGGGGAATATTAACCACGCTTTTAAGG
AATACCACACCAAAACATGCGTGCGCTTCAAGCCCAGGACCACCGAAAAG
GATTACATCTCCATTGGTAGCGGAAAGTCTGGCTGCTGGAGTAGCATTGG
GCGCTTAGGTGGTCGCCAGGAAGTGAATCTGCAGTCGCCCAACTGCTTGC
GTACATACGGCACTCCCATTCACGAGCTGATGCACGCCCTGGGCTTCTTC
CATGAGCAGAATCGTCACGAACGTGACTCCTATGTGCGCGTGATGAAGGA
CAACATCAAGCCCGAGATGATGGTCAACTTCGAGAAGTCCAGTTCCAGGA
CACAGTACGGCTTCGGCGTGGAATACGACTATGGCAGTGTGATGCACTAC
TCCCCCACCAGTTTCACTCGGAATGGCCAGCCCACGTTGAAGGCACTGCG
TGCCACATCCGATGCCAGCCAGATGGGTCAACGCAAGGGCTTCTCAGCCG
GAGATGTGCGCAAGATCAACGCAATGTACAAGTGCAAGGTGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAGTGTCATATCATAATCAT
AATCATAATCATAATCACAACTAGCCTAGAGAATCCTGTCATGACTAGTG
CTGAATCCCACCATAAAAAACGCGGCGGCACGGAGGGTCTGAACAATCAG
ATGGAGTCTGGAGTCATACTGGAATCATCACAGGGATCCA

UFO07643.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG5715-RA 978 CG5715-RA 1..914 28..941 4510 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24293430..24293923 941..448 2470 100 Minus
3R 32079331 3R 24293977..24294418 450..9 2150 99.1 Minus
Blast to na_te.dros performed on 2014-11-27 00:10:31 has no hits.

UFO07643.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:40 Download gff for UFO07643.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5715-RA 1..914 28..941 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:32 Download gff for UFO07643.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5715-RA 1..914 28..941 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:12 Download gff for UFO07643.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5715-RA 1..914 28..941 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:12 Download gff for UFO07643.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24293430..24293921 450..941 100 <- Minus
3R 24293978..24294418 9..449 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:32 Download gff for UFO07643.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20119152..20119643 450..941 100 <- Minus
arm_3R 20119700..20120140 9..449 99   Minus