UFO07643.5prime Sequence
1140 bp (1044 high quality bases) assembled on 2011-07-08
> UFO07643.5prime
CAGTCGACATGTGGGTAAGCCTGGTTAGAAATCACAGCAGTTGGGGAATT
AGCAAAATGGGCAAATCGCAAAATAATACTGGTTCGCTTTTGCTACTGAT
TATACTGGGCATTTCTCTGGGAGATTCCATGCCCCTGGAGGATATGGACT
CCCAGGAAATGATTGACTTGACAGATCTTGGAGATACTCTGTTCGGTAAT
CCGGACGTGGAGACGACTGGAGCTTTGGTTGAGGCACTCGGTGTGGAATC
CCCGCTGAATCCCGAGGAGCTGGGAACCTACCACGAAGGTGACATCCTGA
TTCCACTGAGCTACAGGGACGCCCGATTCAATGGCACTCGTAATGGCATT
TTGGCGCTGAGTTCCCGCTGGCCGGGCGGCGTTGTGCCCTACGAGATCAA
AGGTCCTTTTACCAGCCTTGTTTTGGGGAATATTAACCACGCTTTTAAGG
AATACCACACCAAAACATGCGTGCGCTTCAAGCCCAGGACCACCGAAAAG
GATTACATCTCCATTGGTAGCGGAAAGTCTGGCTGCTGGAGTAGCATTGG
GCGCTTAGGTGGTCGCCAGGAAGTGAATCTGCAGTCGCCCAACTGCTTGC
GTACATACGGCACTCCCATTCACGAGCTGATGCACGCCCTGGGCTTCTTC
CATGAGCAGAATCGTCACGAACGTGACTCCTATGTGCGCGTGATGAAGGA
CAACATCAAGCCCGAGATGATGGTCAACTTCGAGAAGTCCAGTTCCAGGA
CACAGTACGGCTTCGGCGTGGAATACGACTATGGCAGTGTGATGCACTAC
TCCCCCACCAGTTTCACTCGGAATGGCCAGCCCACGTTGAAGGCACTGCG
TGCCACATCCGATGCCAGCCAGATGGGTCAACGCAAGGGCTTCTCAGCCG
GAGATGTGCGCAAGATCAACGCAATGTACAAGTGCAAGGTGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAGTGTCATATCATAATCAT
AATCATAATCATAATCACAACTAGCCTAGAGAATCCTGTCATGACTAGTG
CTGAATCCCACCATAAAAAACGCGGCGGCACGGAGGGTCTGAACAATCAG
ATGGAGTCTGGAGTCATACTGGAATCATCACAGGGATCCA
UFO07643.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:10:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5715-RA | 978 | CG5715-RA | 1..914 | 28..941 | 4510 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:10:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24293430..24293923 | 941..448 | 2470 | 100 | Minus |
3R | 32079331 | 3R | 24293977..24294418 | 450..9 | 2150 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:10:31 has no hits.
UFO07643.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-21 12:19:40 Download gff for
UFO07643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5715-RA | 1..914 | 28..941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:09:32 Download gff for
UFO07643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5715-RA | 1..914 | 28..941 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:12 Download gff for
UFO07643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5715-RA | 1..914 | 28..941 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 00:57:12 Download gff for
UFO07643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24293430..24293921 | 450..941 | 100 | <- | Minus |
3R | 24293978..24294418 | 9..449 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:09:32 Download gff for
UFO07643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20119152..20119643 | 450..941 | 100 | <- | Minus |
arm_3R | 20119700..20120140 | 9..449 | 99 | | Minus |